Roseovarius sp. AK1035: RAK1035_0118
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Entry
RAK1035_0118 CDS
T05517
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rok
Roseovarius sp. AK1035
Pathway
rok00260
Glycine, serine and threonine metabolism
rok00460
Cyanoamino acid metabolism
rok00630
Glyoxylate and dicarboxylate metabolism
rok00670
One carbon pool by folate
rok00680
Methane metabolism
rok01100
Metabolic pathways
rok01110
Biosynthesis of secondary metabolites
rok01120
Microbial metabolism in diverse environments
rok01200
Carbon metabolism
rok01230
Biosynthesis of amino acids
rok01240
Biosynthesis of cofactors
rok04981
Folate transport and metabolism
Module
rok_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RAK1035_0118
09102 Energy metabolism
00680 Methane metabolism
RAK1035_0118
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RAK1035_0118
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RAK1035_0118
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RAK1035_0118
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RAK1035_0118
Enzymes [BR:
rok01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RAK1035_0118
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
SelA
Motif
Other DBs
NCBI-ProteinID:
AWZ18829
LinkDB
All DBs
Position
109602..110918
Genome browser
AA seq
438 aa
AA seq
DB search
MTLARRPWVPPLCEDLIQTLATRTATQDAGTIAARIEALAQDNRRIHNAECFNLNPATNV
MNPRAEALLASGIGSRPSLGYPGDKYEMGLEAIEEIEVIAAELAAEVFGARYAEIRVPSG
AIANLYGFMATCKPGDTIIAPPASIGGHVTHHGAGCAGLYGLRILEAPVHADGYTVDVDG
LRALAKAEHPRLITLGASLNLQEHPVREVRAIADDVGAHLLFDAAHQCGIIAGGAWKNPL
DEGAHLMTMSTYKSLGGPAGGLIVTNDTALAQALDAIAFPGMTANFDAAKSAALAVTLLD
WRSHGHAYAAQMIAVAQALATALEAEGLPVFKAGGIATASHQFAIAAAGFGGGQAASKTL
RRAGFLACGIGLPIAPVAGDMNGLRIGTPELVRWGVTPEHAPRMAALIARALRGNDPDAL
RPEVSDWRQSFDRLHYIT
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgacccttgcccgccgcccttgggtgcccccgctatgcgaagacctgatccagacgctt
gccacccgcaccgccacccaagacgcaggcaccatcgccgcgcgcatcgaggcgttggcg
caggacaatcgccgcatccacaatgctgaatgcttcaacctcaaccctgccaccaatgtg
atgaacccgcgcgccgaggcgcttttggcctctggcatcgggtcgcgcccgtcgctgggc
tatccgggggacaaatacgaaatggggctcgaggcgatcgaggaaatcgaggttatcgcg
gcagaactcgccgccgaggtgttcggtgcccgctatgccgaaatccgcgtgccgtcgggg
gccatcgccaatctctacggtttcatggccacctgcaaacccggcgacacgatcattgcg
ccgcctgccagcatcggcggtcatgtcacccatcacggggcgggctgtgccgggctctac
gggttgcgtatccttgaggccccagttcacgccgatggctatacggtcgatgtcgacggg
ctgcgcgccttggccaaggccgaacacccccggctgatcacacttggcgcgagcctcaac
ctacaggaacatcccgtgcgcgaggtacgcgcaatagccgatgacgtcggcgcgcatctg
ctttttgacgcggcgcatcaatgcggcatcatcgcgggtggcgcatggaaaaacccgctc
gatgagggcgcgcatctgatgacgatgagcacctacaaaagcctcggggggcctgccggg
ggcctcatcgtcaccaacgacaccgctctggcgcaagcgctggatgccatcgcctttccg
ggcatgaccgccaattttgacgcggcgaaatcggcggctctggcggtgacgctgctggat
tggcgcagccatggccacgcctatgccgcccagatgatcgccgtggcgcaggcgctcgcc
acggccctcgaggccgagggcctgcccgtcttcaaggccgggggcatcgccacggcctcg
caccaattcgccatcgcggcggcggggttcggcggcggtcaggccgcatccaagacgctg
cgccgcgcgggctttcttgcctgcggtataggcctgccgattgcgcccgtggcgggggat
atgaacgggctgcgcatcggcacgccggaactggtccgctggggggtaacgccagagcat
gcgccgcgcatggcggcgctcatcgcgcgggcgctgcgcggcaatgaccccgatgcgctg
cgcccagaggtctcagactggcgccagagctttgaccggctgcattacatcacctga
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