Roseovarius sp. AK1035: RAK1035_0378
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Entry
RAK1035_0378 CDS
T05517
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rok
Roseovarius sp. AK1035
Pathway
rok00061
Fatty acid biosynthesis
rok00071
Fatty acid degradation
rok01100
Metabolic pathways
rok01212
Fatty acid metabolism
rok02024
Quorum sensing
rok04146
Peroxisome
Module
rok_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RAK1035_0378
00071 Fatty acid degradation
RAK1035_0378
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RAK1035_0378
09145 Cellular community - prokaryotes
02024 Quorum sensing
RAK1035_0378
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rok01004
]
RAK1035_0378
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rok04147
]
RAK1035_0378
Enzymes [BR:
rok01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RAK1035_0378
Lipid biosynthesis proteins [BR:
rok01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RAK1035_0378
Exosome [BR:
rok04147
]
Exosomal proteins
Exosomal proteins of breast milk
RAK1035_0378
Exosomal proteins of breast cancer cells
RAK1035_0378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AWZ19089
LinkDB
All DBs
Position
complement(366275..368221)
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AA seq
648 aa
AA seq
DB search
MDSVPALLQRNATRFADRPAYREKEYGIWQCWTWAEAEKEIEALALGLINLGVNEGDFVA
VIGRNRPHFYWSMVAAQSVGAIPVPLYQDAAAPEMAYVMEHCGARFAIVQDQEQVDKLIE
VQEGLHQLEHMIYVDPRGLRKYDHHKLHRFIDIQEQGRAAYYEWIEDLKTRRAKLTYDSV
CVMLYTSGTTGKPKGVVLSNRNIIEASKSSSEFDHLTKDEEVLAYLPMAWVGDFIFSIGQ
AYWCGFCVNCPESPETMQTDLREIGPTYFFAPPRVFETQLTNVMIRMEDAGRVKKWLFDH
FMSHARRVGPAILDGKPVSGLDRLKYRLGNLFIYGPLKDTLGLGRVRVGYTAGEAIGPEI
FDFYRSLGINLKQLYGQTEASVFITLQPDGEVRSDTVGVPAPGVEIRISDTGEVFYRSAG
TFEYYYKNPESTASTKDPEGWVATGDAGFFEEGSGHLRIIDRAKDVGKMADGRMFAPKYV
ENKLKFYPNILEAVVFGNGRNACTAFINIDLTAVGNWAERNNIGYASYQELAGHPKVLET
IKGHVEEVNRSLADDPMLSHCQVHRFLVLHKELDADDGEMTRTRKVRRGVISEKFDDLLT
ALYDGSPEIYTTTEVTYEDGRKGAISATLKIVDAKVASVATMQRVAAE
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggattccgttccggcgctcttgcaacgtaacgccacgcgatttgccgatagaccggcc
tatcgcgaaaaggaatatgggatctggcagtgctggacatgggccgaggccgagaaggag
atcgaggcgcttgcgctcgggctcatcaatcttggtgtgaatgagggcgatttcgtcgcc
gtcatcggccgcaaccgtccgcatttctactggtccatggtcgccgcgcaatctgtcggt
gcaatccccgttccgctctaccaagatgctgccgcccccgagatggcctatgtgatggag
cattgtggggcacgctttgccatcgttcaggatcaagaacaggtcgacaagctgatcgag
gtgcaggaggggctgcaccaactggagcatatgatctatgtcgatccgcgcggcttgcgc
aaatatgatcaccacaagttgcaccgcttcatcgacattcaggagcagggccgcgccgcc
tattacgaatggatcgaagatctcaagacgcgacgcgcgaaactgacctatgacagcgtt
tgcgtcatgctttacacctcgggcaccacgggcaagcccaagggcgtggtgctgagcaat
cgcaacatcatcgaggcgtccaaatcgtcttccgagtttgaccatctgaccaaggacgaa
gaggtgctggcctatctgccgatggcttgggtgggcgatttcattttctccatcgggcag
gcctattggtgcgggttttgtgtcaactgtcctgagagcccagagaccatgcagaccgac
ctgcgtgaaattgggcccacctatttctttgcgccgccccgcgtgttcgagacgcagttg
accaatgtgatgatccggatggaggatgcgggccgcgtcaagaaatggctctttgaccat
ttcatgtcccatgcccgccgcgtcggccctgcgatcctcgatggtaagccggtcagcggt
ctggaccgcctcaaataccggcttgggaacctctttatctatggcccactcaaggacacg
cttggccttggccgcgtgcgcgtgggctatactgcaggtgaggcgattgggccggagatt
ttcgatttctatcgctcgcttggcatcaacctcaaacaactctacgggcaaaccgaggct
tcggtgtttatcaccctgcaacccgatggcgaagtgcgctctgacacggttggcgtcccc
gcgcccggcgtggaaatccgtatcagcgacaccggcgaggtgttctatcgttcagcgggc
acgtttgaatattactacaagaatcctgaaagcacggcctcaaccaaagaccccgaaggt
tgggtcgccaccggtgatgcgggctttttcgaggaaggcagtgggcatcttcgcatcatc
gaccgcgccaaggatgtgggcaagatggctgatggccggatgttcgctcccaaatatgtg
gaaaacaagctcaagttctatcccaatattctcgaggcggtcgtctttggcaacgggcgt
aacgcctgcaccgcctttatcaacatcgacctgacagcggtgggtaactgggcggagcgg
aacaatatcggctatgcctcgtatcaggaacttgccgggcatccgaaggtgcttgaaacg
atcaagggccacgtcgaagaggtcaatcgcagcctcgcggatgatccgatgctgtcgcat
tgccaggtgcatcgcttcctcgtgctgcacaaagaactggatgccgacgatggcgagatg
acgcgcactcgcaaggtgcggcgtggtgtgatctctgagaaattcgatgacctgctgacc
gcgctctatgacgggtcgcctgaaatctacaccaccactgaagtgacctatgaggatggc
cgcaagggggcgatcagcgcgacgctcaagatcgtcgatgccaaggtggcctcggtggcg
acgatgcaaagggtggcggcagaatga
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