Roseovarius sp. AK1035: RAK1035_0525
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Entry
RAK1035_0525 CDS
T05517
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rok
Roseovarius sp. AK1035
Pathway
rok03030
DNA replication
rok03430
Mismatch repair
rok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RAK1035_0525
03430 Mismatch repair
RAK1035_0525
03440 Homologous recombination
RAK1035_0525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rok03032
]
RAK1035_0525
03400 DNA repair and recombination proteins [BR:
rok03400
]
RAK1035_0525
Enzymes [BR:
rok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RAK1035_0525
DNA replication proteins [BR:
rok03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RAK1035_0525
DNA repair and recombination proteins [BR:
rok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RAK1035_0525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PAS_9
PAS_4
Transport_MerF
PAS_8
PAS
Motif
Other DBs
NCBI-ProteinID:
AWZ19236
LinkDB
All DBs
Position
complement(517302..519368)
Genome browser
AA seq
688 aa
AA seq
DB search
MIERLTARLGLRLRFALFFAALGLGGAGVIAGALWFGYARAGGPLDGYVIGGMVATLGVM
GLSAWIGLLFDENVAKPILALASDLTTRARADVDLQINETQAKHLSTLAPAANAINAALS
EARAARARAVERETARIAREKALFEALFRDLGEGAVVSTPDNRVMLYNRMAQELLGEIGL
DRPLSNVLRPEPIMEALSRMQDARVRGRIEAETFLAASANGKRFLLGRVSPILSDEELSG
HVLIFRDATEDLSAHAQQDHLFNRLLEGVRRPAATIGALLDVLQSAEDLPPESRAKFRKG
IEDEVARLFECLREMGARHAGIKSRSWPMSPVAAAHVFDGLSVQAPVPLGVVRSEAMLSC
DGFAVTTLLGGILGHLAEEGTRDGFSLSAEPDGAETRLILSWQGEAVTDGQLTGWLKAPL
STAYGDYSGRDALSAHQTDVWAEAGADGHRIVLPLATAAPPLEPGDARPEFYDFNLPEVA
SGELANRPLSDLSFVVFDTETTGLSPRGGDEIVQIAGLRIVNGRILRGESFDMLVNPGRP
IPPASTRVHHISDDMVQDAPDIIEAGRRFHDFCQGAVLVAHNAPFDLAFLRLKEKVIGRR
FDNPVLCTVLMSAGLFDHSGQHTLDALCERFGITIPPEARHTAMGDTVATAEVFVRMLGL
LQAKGVTTLGGAIAEEGRMTKIRKAQNY
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgattgaacgcctgacagcgcgtttgggcctcaggctccggttcgcgctgttttttgct
gctcttgggttggggggcgcgggggtaatcgcgggcgcgctgtggtttggctatgcgcgg
gcgggcgggccgctggatggctatgtcatcggcggaatggttgcgacgctgggggtgatg
gggctttcggcgtggatcggtcttttgtttgatgagaacgtggccaagcccattctcgcg
ctcgcctcggacctgaccacgcgggcgcgggccgatgtggatttgcagatcaacgagacg
caggccaagcatttgagcacgctggcccctgccgccaatgcgatcaacgcagccctttca
gaggcgcgcgccgcgcgcgcccgcgcggtagagcgcgagacggcgcggattgcccgcgaa
aaggcgctgttcgaggcgctgtttcgtgatctgggcgagggggcggtggtgtccacgccc
gacaaccgcgtcatgctttataaccgtatggcgcaagagctgttgggggagattggcctt
gatcgcccgctgtcgaatgttctgcgccccgagcccattatggaggcgctgtcgcggatg
caggatgcgcgggtgcgcgggcgcatcgaggccgagacattccttgcggcctctgcgaac
ggcaagcggtttcttttgggccgcgtgagcccgatcctgtcggatgaggaactatcgggg
catgtgcttatcttccgcgatgcgaccgaggatctaagcgcgcatgcgcagcaggatcat
ctgttcaacaggctgttggaaggggtgcgccgacctgcggccaccattggtgcgttgctg
gatgtgctgcaatccgccgaggatctgccccccgagagccgcgccaagtttcgcaaaggg
atcgaagacgaagtggcgcggctgtttgagtgtctgcgtgagatgggcgcgcggcatgcc
gggataaaatcccgaagctggccgatgtcgccggttgctgcggcgcatgtgttcgacggc
ttgagcgtgcaggcgccggtgccgctaggggtggtgcgaagcgaggcgatgctgagttgc
gatggctttgccgtgaccacgcttttgggcggcatccttgggcatcttgcagaggagggc
acgcgcgacggattcagcctgagtgccgagccggacggggcggaaacgcgcctgatcctg
agttggcagggtgaggcggtgacggatgggcaattgactggctggcttaaggcgccactg
tccaccgcctatggggattattcgggccgtgatgcgctgagcgcgcatcagaccgatgtc
tgggccgaggcgggggcagacgggcatcgcatcgtgctgcctttggccaccgctgcgcca
ccgctggagccgggggatgcgcggcccgagttttatgatttcaacctgcctgaggtggca
agcggggaattggccaaccggcccctgtctgacctgagtttcgtggtgtttgacaccgaa
accaccggcctttcgccacggggcggggatgagatcgtgcagattgccgggctgcgtatc
gtcaacgggcgcattctgcgcggcgagagtttcgatatgctggtcaatccgggccgcccg
attccgcccgcctcgacgcgggtgcatcatatcagcgatgacatggtacaggacgcgccg
gatatcatcgaggctgggcggcggtttcatgatttttgccaaggggcggtgctggtcgcg
cataacgcaccgttcgatctggcgtttctgcggctcaaggaaaaggtgatcgggcggcgg
ttcgacaatccggtgctgtgcacggtgctgatgtcggcggggctgttcgaccatagcggg
cagcatacgctggatgcgctttgcgagaggttcgggatcaccatcccgcctgaggcgcgg
catacggcaatgggcgatacggttgccacggctgaggtctttgtgcggatgctgggcctg
ttgcaggccaagggtgtcaccacgctggggggcgctattgccgaagaggggcggatgacc
aagattcgcaaggcgcagaattactga
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