Roseovarius sp. AK1035: RAK1035_0896
Help
Entry
RAK1035_0896 CDS
T05517
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rok
Roseovarius sp. AK1035
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rok03400
]
RAK1035_0896
Enzymes [BR:
rok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RAK1035_0896
DNA repair and recombination proteins [BR:
rok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RAK1035_0896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DUF1045
Motif
Other DBs
NCBI-ProteinID:
AWZ19607
LinkDB
All DBs
Position
complement(884575..887946)
Genome browser
AA seq
1123 aa
AA seq
DB search
MTARDAATQAQVEAARPDLSTWLSANAGSGKTRVLTDRVARLLLDGVDPQHILCLTYTKA
AASEMQNRLFRRLGAWAMLADAALMQELDLLGHEGAITEQTLRDARRLFARAIETPGGLK
IQTIHSFCASLLRRFPLEADVTPQFTEMEDRTATLLRAEIVEDLAAGPQAATFYALARHY
SGETLEKLTAEIVRNRSGFAQPLSDADLAALFDQPEGLSAQMIRDGVFLGSEQALLGHLM
PALQAGSANDVKAAAKLAQMSALDLRALPVLEDVFLTGKGAKSPFSAKLGSFPTKATQGV
LASVLPQIEQWMLRVEAARPARLALLAMQKTRALHDFARAFLPAYERAKQLRGLLDFDDL
ILRARDLLTDPAVAAWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAQEFTSGEGARAD
VARTIFVVGDKKQSIYSFQGADPREFDRMQQEFGLRLSATNTPLQSRVLAYSFRSSRAIL
TTVDCCFDQSSESGFTPEEGHKAFFDTLPGRVDLWPLVEKPDEDEPPAWHMPVDIRATND
PAILLARQVAAAMRDMITARQAIPDPKSPSGFRAVQPGDFLILVRRRSALFHEIIRECKA
QGLPIAGADRLKVGAELAVRDLEALLSFLATPEDSLALATALRSPLFGWSEHQLYTLAQG
RNRPYLWEELRARAAEHPDTITILRDLLDHADFLRPYDLIERVLTRHEGRRRLLARLGTE
AEDGIDALLAQAMAYERRAVDSLTGFLVWMETDDLEIKRQLDSAGNRIRVMTVHGAKGLE
APVVILPECGVWRTPPAPQIVTQAGHALWTGRADDMPPSLAAALDTERRALLAERDRLLY
VAMTRAETWLIVAAHGDLGKQGDTWYEKVQRGMLAAGAQPHSFAHGPGLRLDHGIWAETE
TDSAPSAPPQTITLDPLFQRPAPLPARIKTLSPSDLGGAKALPGERGLDEEAAKRRGRQI
HRLLEFLPTVPAHDWPATAARLLSNGGDAATGEELALLLAEADKVLTRPSLLALFTPAAL
TEVAITATLDPLQGRRIHGVIDRLIIDDTRILAVDFKTNALVPDTPADCPDALLRQMGAY
AHALGQLYPDHRIDTAILWTRTATLMPLPHDLVTAALESTTIA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgcgtgatgccgccactcaggcacaggtcgaggccgcgcgccccgacctctcg
acatggctgtcggccaatgccggatcgggcaaaacgcgggtgcttacagaccgtgtggcg
cggcttttgctagatggggtcgatcctcagcatatcctctgcctcacctataccaaggcc
gcggcaagcgagatgcagaaccgtctttttcgccgccttggcgcttgggcgatgctggcc
gatgccgcgctgatgcaagagcttgaccttttgggccatgagggcgcgatcaccgaacag
accctgcgcgatgcccgccgcctctttgcccgcgcgatcgagacgccgggtgggctgaaa
atccagacgatccactccttctgcgcctcacttctgcgtcgttttccgctcgaggcggac
gtcacgccgcagttcaccgagatggaggaccgcactgccaccctcttgcgcgccgagatt
gtcgaagacttggccgccgggccgcaggccgccacgttttacgcccttgccagacactat
tccggcgaaactctggaaaaactgaccgctgaaattgtccgcaaccgcagtggatttgca
cagccgctcagcgatgctgatctggccgccctctttgatcagcccgaggggctgagcgcc
cagatgatccgtgacggggtgtttctgggcagtgaacaggcgcttctcggtcacctcatg
cctgcgcttcaggccgggtctgccaatgacgtcaaggccgccgccaagctggcgcaaatg
agcgcgttggacctgcgcgcgctgcccgtgctcgaggatgtctttctcactggcaaaggg
gcaaaatcgcccttttccgccaagttaggctcttttcctaccaaggcgacccaaggtgtc
cttgcctctgtcctgccgcagatcgaacaatggatgctgcgcgtcgaagcggcgcgcccg
gcgcgccttgccctccttgcgatgcagaaaacccgcgctttgcatgacttcgcccgcgct
ttcctgcccgcctatgaacgcgccaagcaattgcgcggccttcttgatttcgacgatctg
atcctgcgcgcccgcgatcttttgaccgatccagcggtcgcggcttgggtgctctacagg
cttgatggtggcatcgaccatattcttgtggacgaggcgcaagacaccagccccgtgcaa
tggcaggtcatcgaacgtctggcgcaggaattcaccagcggcgagggcgcgcgcgccgat
gtggcgcgcacgatctttgtcgtgggcgacaagaaacagtcgatctattcctttcagggg
gccgacccgcgcgaattcgaccgcatgcagcaggaatttggcctgcgtctgagcgccacc
aacaccccgctgcaatcgcgcgttctggcctattcctttcgctcgtcgcgggcgatcctg
accaccgtcgattgctgctttgatcaaagcagcgagagcggttttacgccggaagagggt
cacaaagccttctttgataccctccccggtcgcgtcgatctctggcctctggtcgagaaa
ccggatgaggacgagccgcccgcctggcacatgcccgtagacatccgcgccaccaacgat
ccggcaatccttttggcgcggcaggttgcggcggccatgcgcgatatgatcaccgcgcgg
caggccatccccgatcccaaatcgcccagcggttttcgcgccgtgcaacccggtgatttc
ctcatccttgtgcgccgccggtccgcgctctttcacgagatcatccgcgaatgcaaggcg
cagggcctgcccatcgccggggctgaccggctcaaggtgggggcggaacttgccgtgcgc
gatcttgaggcgctcttgtcctttctcgccacgcccgaggatagtctggcgctggccacc
gccctgcgctcgccgctctttggctggtccgaacaccagctctacaccctcgcgcagggc
cgcaatcgtccctatctctgggaggaattgcgcgcccgcgccgccgagcatcccgacacc
atcacaatcctgcgtgacctgcttgatcacgccgatttcctgcgcccctatgacctgatc
gagcgtgttctgacccgccacgaaggccgccgccgtctgctcgcccgtctggggaccgag
gcggaggatggcattgacgcccttctggcgcaggccatggcctatgaacgtcgcgcggtg
gatagcctcacgggctttctcgtctggatggaaaccgacgatctcgagatcaagcgccaa
ctcgacagcgctggcaaccgcatccgcgtcatgaccgtgcatggggccaaggggcttgag
gcgcccgtcgtgatcctgcctgaatgtggcgtttggcgcacgcccccagcgccacagatc
gtgacgcaagcgggccatgccctttggaccgggcgcgccgatgacatgccgcccagcttg
gccgcagcgctcgatactgaacgccgcgcgcttttggcggaacgtgaccgcctgctctat
gtcgccatgacgcgggccgagacgtggttgatcgttgccgcccatggcgatctgggtaaa
caaggcgacacctggtatgaaaaggtgcagcgcgggatgctggccgcaggcgcgcaaccc
cacagctttgcccatggccctggcctgcgtcttgatcatggcatttgggccgaaacagag
actgactctgcgccctcggcgccccctcaaacaatcaccctcgatccgctctttcagcgc
cccgccccgctccctgcgcgcatcaaaacgctcagcccttcggatttgggcggggccaag
gcgctgcccggcgaacgcgggctggatgaagaggcagccaaacggcgcggccgtcagatc
caccgcctgcttgaattcctgcccactgtgcctgcccatgactggcccgccaccgctgcg
cggcttctgtccaatgggggtgatgccgcgacaggcgaagaactcgcccttcttctcgcc
gaggccgacaaggtgctgacacggcctagccttctggcccttttcacgcccgctgcgctg
acagaggtggcgatcaccgccaccctcgacccgcttcaggggcggcgcatccatggtgtg
attgaccgcctgattatcgacgatacccgcatcctcgccgttgatttcaagaccaacgcg
ctggtgcccgacacgcccgccgactgccctgatgccctgctgcggcagatgggggcctat
gcccacgcgctcgggcagctctacccggatcatcgcattgacaccgcgatcctctggacc
cgcactgccacgctcatgcccttaccccacgatcttgtgactgcggcgctggaatccacc
accatcgcttga
DBGET
integrated database retrieval system
