Roseovarius sp. AK1035: RAK1035_1013
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Entry
RAK1035_1013 CDS
T05517
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rok
Roseovarius sp. AK1035
Pathway
rok03030
DNA replication
rok03410
Base excision repair
rok03420
Nucleotide excision repair
rok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RAK1035_1013
03410 Base excision repair
RAK1035_1013
03420 Nucleotide excision repair
RAK1035_1013
03440 Homologous recombination
RAK1035_1013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rok03032
]
RAK1035_1013
03400 DNA repair and recombination proteins [BR:
rok03400
]
RAK1035_1013
Enzymes [BR:
rok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RAK1035_1013
DNA replication proteins [BR:
rok03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RAK1035_1013
DNA repair and recombination proteins [BR:
rok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RAK1035_1013
NER (nucleotide excision repair)
GGR (global genome repair) factors
RAK1035_1013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AWZ19724
LinkDB
All DBs
Position
1007856..1010636
Genome browser
AA seq
926 aa
AA seq
DB search
MHLIDGSSFIFRAYHALPPLTRKSDGLPIGAVSGFCNMLQRYVEGNNGHDAPTHVAVIFD
KGSHTFRNDLYPEYKANREAMPEDLRPQIPLTREATRAFNIACEEKEGYEADDIIATLAC
QARDLGGRVTIISSDKDLMQLVGDGVEMLDAMKNRLIDVEGVREKFGVSPDRVVDVQALA
GDSVDNVPGAPGIGIKTAALLINEFGSLEALLDRAEEIKQPKRRDTLIEKRAQIEMSKRL
VQLDCNTPLDFTLDDLEVRDPDPEMLLGFLAQMEFRTLSKRIAEALGAVAPTIPEPAAQS
AATAPDQSPDWPAIEPETYVHVSDRATLDAWIATIRAQGYVAFDTETTSLNEMQADLVGI
SLATAPGRACYIPVAHKDGAADDLFGSDARAEGQLPLDEVLNALKPVLEDDAILKIGQNM
KYDAKILAAHGITVAPIDDTMLMSYALHAGLHGHGMDTLSERYLNHSPIPIRSLLGSGKA
AVTFDRVPVAEAVKYAAEDADITLRLWLTLKPQLHRAQVTTVYETLERPLVPVLARMERD
GVLVDRDTLRAMSGKFAQKMAGLESEIHALARRSFNVGSPKQLGEILFDEMGLPGGEKGK
TGAYATGADVLEDLATEHDLPARVLDWRQLSKLKSTYTDALQDHIDPDTGRVHTSYLQTG
ASTGRFSSSDPNLQNIPVRSEEGRRIREAFVAAPGNRLVSLDYSQIELRILAHVAGIETL
KQAFRDGHDIHAMTASEMFNVPLAEMTPEIRRQAKAINFGVIYGISGFGLARNLRIPRGE
AQGFIDRYFERFPGIKDYMDATTAFAKEHGYVQTLFGRKIHTPEIAAKGPRAGFARRAAI
NAPIQGTAADIIRRAMIRMPEAIEGLPCKMLLQVHDELIFEVAEDSVDRLIDVARAVMQG
AADPAVRLDVPLVVDAGQGRNWAEAH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
ttgcatctgatcgacggatcgtcgttcattttccgcgcctatcacgcgctgccgccgctg
acgcgcaaatccgacgggctgcctatcggggccgtgtcagggttttgcaatatgctgcaa
cgctatgttgagggcaacaacggccacgacgcgcccacgcatgtcgccgtcatctttgac
aagggcagccatacgtttcgcaacgatctttatcccgaatacaaggccaaccgcgaagcg
atgccagaggacctgcgcccgcagatcccgctgacgcgcgaggccacgcgcgccttcaac
atcgcctgcgaagagaaagagggctacgaggccgatgacatcatcgccacgctcgcctgt
caggcgcgcgatctgggcggacgggtgacgatcatcagctccgacaaggacctgatgcag
cttgtcggcgatggagtcgaaatgctggatgcgatgaaaaaccgcctgattgatgtggag
ggcgtgcgcgagaaattcggcgtcagcccggaccgggtggtcgatgtgcaggcgctggcc
ggcgatagtgtcgataacgtgcccggtgcgccggggatcgggatcaagacggcggcgctt
ttgatcaacgaattcggctcactcgaggcgcttttggaccgcgccgaagagatcaagcag
cccaagcgccgcgatacgttgattgaaaagcgcgcacagatcgagatgtcgaagcggctg
gtgcaactggattgcaacacgccgctcgactttacgctcgacgatctggaagtgcgcgat
cctgatcccgagatgttgttggggtttctggcgcagatggagtttcgcaccctctcgaag
cgcatcgccgaggccttgggcgcagtggcgccgaccattccggaacctgccgcgcaaagc
gctgccacggcacccgatcaatcccccgattggccagcaatagagcctgagacctatgtc
catgtctcggaccgcgcgacgctggacgcctggatcgccaccatccgcgcccaaggctat
gtcgcctttgataccgagaccacctcgctcaacgaaatgcaggccgatctggtgggcatt
tcgctggctacggcaccgggccgcgcctgttacatcccggtggcgcacaaagacggggcg
gcggatgatctctttgggtcggacgcgcgggccgaggggcaattgccgctggacgaggtg
ttgaacgccctcaaacccgtgcttgaggatgacgccatcctcaagatcggtcagaatatg
aagtacgacgccaagattctggccgcccatggcataaccgtggcccccatcgacgatacg
atgctgatgtcctatgcgctgcatgccgggctgcacgggcatgggatggacacgctgtca
gagcgctatctgaaccatagcccgatcccgatcagatccctgctgggtagtggcaaagcc
gctgtcacctttgaccgcgtgccagtggccgaggcggtgaaatatgccgcagaggatgcc
gacatcacgctgcgcctctggctcacgctcaagccgcagctgcaccgtgcccaggtcacc
acggtctacgagacgctggaacgcccgttggtgcctgtgctggcgcgcatggagcgggat
ggcgtgctggtcgaccgtgacacgctgcgcgccatgtctggcaaattcgcccagaaaatg
gccggcttggaatcagaaattcacgcgcttgccaggcgcagtttcaatgtcggttcgccc
aagcaattgggagagatcctgtttgacgaaatgggcctgccgggcggcgaaaagggcaaa
accggtgcctatgccaccggggccgacgtgctcgaggatctggcgacagagcatgatctg
cccgcgcgcgttctggattggcggcaattgagcaagctcaaatccacctatactgacgcg
cttcaggatcacatcgatccggatacggggcgggtccacacctcctatctgcaaaccggg
gccagcacagggcggttttcctcgtcagaccccaatctgcaaaacattcccgtgcgcagc
gaagaagggcgacgcatccgagaggcctttgttgcggcccccggcaatcgtctggtcagt
ctcgattacagccagatcgagttgcgcattttggcgcatgtggccgggatagagacgctc
aagcaggcgtttcgcgatggccatgacattcacgccatgaccgcgtcagagatgttcaac
gtgccgctggccgagatgacgcccgagatcaggcgtcaggccaaggcgataaatttcggg
gtgatctatggcatctcgggctttggtcttgcgcgcaatctgcgcattccaagaggcgag
gcgcagggattcatcgaccgctatttcgagcggtttccgggcatcaaggattacatggac
gccaccaccgcctttgccaaggaacatggctatgtccagaccctgttcgggcgcaagatc
cacacgcccgagattgccgccaaaggcccgcgcgccggattcgcccggcgtgcagcgatc
aacgcgccaattcaaggcacggcggcggacatcattcgccgcgccatgatccgtatgccc
gaggcgatcgaggggctgccctgcaagatgctgttgcaggtccatgacgaattgatcttt
gaagtggccgaggacagcgtagaccgcttgatcgacgttgcgcgcgctgtgatgcagggg
gccgcagacccggcagtgcgtctagacgtgcccctggtagtggatgcgggccaaggccgc
aattgggcggaagcgcattaa
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