Roseovarius sp. AK1035: RAK1035_1228
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Entry
RAK1035_1228 CDS
T05517
Name
(GenBank) Oligopeptide transport system permease protein OppB
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
rok
Roseovarius sp. AK1035
Pathway
rok02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RAK1035_1228
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rok02000
]
RAK1035_1228
Transporters [BR:
rok02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RAK1035_1228
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_29
AAA_16
AAA_22
RsgA_GTPase
DUF87
nSTAND1
TniB
Sigma54_activat
NACHT
PRK
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AWZ19939
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Position
1234528..1236219
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AA seq
563 aa
AA seq
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MIKSKDVLLKIRDLKIQGYSDETWVDIIKGVDLTLHRGEVMGLIGESGAGKSTIGAACMG
YARDGTRISNGSIEFDGMELTTASEGERRMLRGSRIAYVAQSAAASFNPAHKIIDQHTEA
PLQYRLKKRLEAQEDAMDLYERLRLPNPKEIGFRYPHQVSGGQLQRAMTAMAMSCRPDLI
IFDEPTTALDVTTQIEVLAAIRDIVDQFNTAAIYITHDLAVVAQMADTIKVLLKGREVEE
APTKQMLDNPQEEYTKSLWAVRSFQSPQRHRPKDGVPLISVRNVDASYTGGAKVLDDVSF
DIYEGMTVAVVGESGSGKSTTARVITGLLPPSKGEVLFKGKPFPPSYKDRTKDQLRQCQM
IYQMADTALNPKVRISEIIGRPAAFYSGLKGVALKNRVDELLDLIELEPSQYYNRYPPEL
SGGQKQRIGIARALAAEPTFIVCDEVTSALDQLVAEGILRLLDRLQNELGLAYMFITHDL
ATVRSIADEVVVMQHGRVVEQGPKDEMFTPPHHPYTDLLLSSVPEMDPNWLTTLLEERGI
DNVGDAAAARIDPNDPKVSGANL
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagagcaaagacgtacttctgaaaatccgtgacctgaaaattcagggctattcc
gacgaaacctgggtggacatcatcaagggcgtggacctgaccctccatcgtggcgaggtg
atgggcctgatcggtgaatcgggtgcgggtaaatcgaccatcggcgcggcctgcatgggc
tatgcccgcgatggcacgcgcatttccaacggttcgatcgagttcgacgggatggaactg
accaccgcctccgagggtgagcggcgcatgctgcgcggctcgcgcattgcctatgtggcg
caatcggcggcggcctcctttaatccggcgcacaagatcatcgaccagcacaccgaagcg
ccgctgcaataccgtctgaaaaagcggctagaggcgcaagaggatgccatggacctctat
gagaggttgcgcctgcccaaccccaaggaaatcggctttcgctatccgcatcaggtttct
ggcgggcagttgcagcgtgcaatgaccgcgatggccatgtcctgtcggcctgatctgatc
atctttgatgaacccacaaccgcgctcgacgtgaccacgcagatcgaggttttggccgcg
attcgcgacatcgtcgatcaattcaacaccgccgcgatctacatcacccatgaccttgcc
gtggtggcgcagatggccgacacgatcaaggtgctactcaaagggcgcgaggtcgaagaa
gcgcccaccaagcagatgctcgacaatccgcaggaagaatataccaaatccctctgggct
gtgcgcagctttcaaagcccgcaacgccatcgccccaaggatggcgtgcccctgatttca
gtgcgcaatgtcgatgcctcctacaccggcggggccaaggtgctggatgatgtcagtttc
gacatttatgaaggcatgaccgttgcggtggtgggtgaatccggctcgggtaaatccaca
acagcgcgggtgatcacaggtcttttgccgccctccaagggcgaagtgttgttcaagggc
aaaccctttccacccagctacaaggaccgcaccaaggatcaattgcgccagtgccagatg
atctatcagatggcggataccgcgctcaatcccaaggtccggatttccgagatcatcggg
cgtccggccgccttttattcggggctcaaaggggtcgcgcttaagaaccgggtggacgaa
ttgctcgatctgatcgagttggaaccctcgcaatattacaaccgttatccgcctgaattg
tctggcggccaaaagcagcggatcggtattgcccgcgcccttgcggcggaaccaaccttt
atcgtctgcgacgaggtgacatcggcccttgatcagctggtcgccgaaggtatcctgcgc
ctgctcgaccggctgcagaacgagttggggctggcctatatgttcattacccatgatctc
gcaacggtgcgttccatcgccgatgaggtggtggtgatgcagcatggcagagtggttgag
cagggccccaaggacgagatgttcacaccgccacaccacccctacactgatctgctgctc
agctcggtgccagagatggaccccaattggctaaccacgttgctcgaagagcgcgggata
gacaatgtcggcgatgccgccgcagcgcgaatcgatccaaacgatcccaaggtctcgggt
gcgaacctttga
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