Roseovarius sp. AK1035: RAK1035_1600
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Entry
RAK1035_1600 CDS
T05517
Name
(GenBank) Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rok
Roseovarius sp. AK1035
Pathway
rok02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RAK1035_1600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rok02000
]
RAK1035_1600
Transporters [BR:
rok02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RAK1035_1600
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
AWZ20311
LinkDB
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Position
complement(1652654..1653925)
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AA seq
423 aa
AA seq
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MAKPKVGYSRRALLKAGGAAFAASALPAPMLWAQDTKDIVLRQFGTGVSNLNDVANKVKE
DLGFTLEMTALDSDSVTQRAATQPDSFDIADIEYWICKKVWPTGNLQAMDTARIANYDKI
VGIFRSGKLTPTSTIAQGTAPHSVGFVDGPGSTSFASEETGWMTLIPTIYNADTLGIRPD
LIGRPIESWTELLNPEFKGKASILDISSIGIMDMAMVCEAMGAVEYGDKGNMTRDEIDKT
MAIFTEAKKNGQFRAFWKSFDESVNLMASGEVVIQSMWSPAITAVKSRGIPCVYQPLKEG
YRSWGGGIGLSASLSGMELDAAYDYINWYLSGWVGGYLMRQGYYSAVPETSKNFMSENEW
GYWFEGKPATDVITSPTGDTLAQAGEVRDGGSFNERMGAVACWNAVMDENQYMVRKWNEF
IAA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacccaaggtcggctatagtcgtcgcgccctactcaaggccgggggcgcagca
tttgccgcctccgcactgcccgcccccatgctctgggcgcaggataccaaggacatcgtg
ctgcgccagtttggcaccggtgtgtcgaacctcaacgacgtggccaacaaggttaaagag
gacctcggctttaccttggaaatgacggcgctcgacagcgatagcgtcacccagcgcgca
gccacccagcccgatagctttgacattgccgatatcgaatactggatctgcaaaaaggtt
tggccgaccggcaaccttcaggccatggataccgcgcgtatcgccaattacgacaagatc
gtcggcatctttcgctcgggcaagctgacgcccacgtcgaccattgcccaaggcaccgcg
ccgcattcggtgggatttgtcgacggccccggcagcaccagctttgcgagtgaagaaacc
ggctggatgacccttattccgacgatttacaatgccgatacgctagggatccgcccagac
ttgatcggccggcccatcgaaagctggaccgagcttttgaaccccgaattcaagggcaaa
gcgtcgatccttgatatttcgtccatcggcatcatggatatggccatggtctgcgaggct
atgggcgcggtcgaatatggcgacaagggcaacatgacccgcgacgagatagacaagacc
atggcgatctttactgaggccaagaaaaacggacagttccgcgccttttggaaaagtttt
gatgagagcgtgaacctgatggcgagtggagaggtggtgatccagtcgatgtggtcaccc
gccatcaccgcagtcaaatcacgcggcatcccttgcgtgtatcagccgctaaaagaaggc
tatcgcagttgggggggcggtatcggcctgtccgcatccctatccggaatggagctggat
gcggcctatgactatatcaactggtatctctcgggctgggttggcggctatttgatgcgg
cagggctattactctgcggtgcccgagacctccaaaaacttcatgtccgagaacgaatgg
ggctactggttcgagggcaagcccgcaacggatgttatcacctcgcccaccggcgatacc
cttgcgcaggccggagaggtgcgtgatggcgggtcgttcaacgagcgtatgggcgctgtg
gcctgctggaacgcggttatggacgaaaaccagtatatggtgcgcaagtggaacgagttc
atcgctgcatga
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