KEGG   Roseovarius sp. AK1035: RAK1035_1799
Entry
RAK1035_1799      CDS       T05517                                 
Name
(GenBank) Response regulator of zinc sigma-54-dependent two-component system
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
rok  Roseovarius sp. AK1035
Pathway
rok02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rok00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RAK1035_1799
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:rok02022]
    RAK1035_1799
Two-component system [BR:rok02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   RAK1035_1799
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_2 AAA_5 AAA_16 FleQ TadZ_N DUF6716 AAA_22 GFO_IDH_MocA
Other DBs
NCBI-ProteinID: AWZ20510
LinkDB
Position
1853487..1854863
AA seq 458 aa
MSLPVFIPRVLIVDDDADLRASTVQALEIAGAAVQDLSSAERALDFISFGFPGVVLSDIR
MPGMDGLTLMSRIHEIDREIPVILMTGHGDVQLAVRAMREGAHDFIEKPFSASQMTELVA
RALSFRRLVLENRVLRAAVGQADDLEQRLIGRSNAMIDLRRRIRTIGPAETDVLIVGETG
AGKEVVARALHDLSPRARRPFVVIDCAAIPAPLIESELFGHEQGAFAGAMRARTGKFEHA
SGGTVLLDDIAALPPPLQGKLLRVVEDRVVTRLGSNEAYTLDIRIIATARVPLIGEVDAG
RFRADLLYRLNVVTLDVPPLADRREDIALLFLRLLAEAAARHRVDTVPEVPPALLANIAA
REWPGNVRELRNAADRFALGLGLQTDDEKTPAPQRLADRVAAFERREIEAVLAANGGSLK
PVYEALGLSRKSLYEKIQKLGIDKTAFILDAEGRDQDG
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgagccttcccgttttcatcccgcgcgtgcttatcgtcgacgatgatgcagacctgcgg
gcctcgaccgtgcaggcgctggaaattgcgggcgctgcggttcaggatctgtcctcggca
gaacgcgcgctggatttcatcagctttggctttcccggcgtggtgctaagcgacatccgc
atgcccggcatggacgggctgacactgatgagccgcatccacgagatcgaccgcgagatt
ccggtgatcctgatgaccgggcatggcgatgtgcaactcgctgtgcgcgcgatgcgcgaa
ggggcgcatgacttcatcgagaaacctttttccgcaagtcagatgaccgaactggttgcc
cgtgccctcagcttccgccgcttggtgctggaaaaccgggtgttgcgcgcggcggtaggg
caggccgatgatctggagcagcggctgatcgggcgctcgaacgcgatgatcgacctgcgc
cgccgcatccgcaccattggccccgccgaaaccgatgtgctaatcgtgggtgaaaccggg
gcgggcaaggaagtggtcgcgcgcgcgctgcatgatctgtcgccacgggcgcggcggcct
tttgtcgtcatcgactgcgcagcgatcccggcccccctgattgaaagcgaattgttcggc
catgaacagggtgcctttgccggggcgatgcgggcccggacgggcaagtttgaacacgca
tcgggcggaaccgtgctgcttgacgacattgccgccttgccgcccccacttcagggcaaa
ctgctgcgcgtggtcgaggatcgcgtcgtcacccgccttggctcgaacgaggcgtatacg
ctcgatatccgtatcatcgccacggcacgcgtgcccctgatcggcgaagttgatgcgggc
cgttttcgcgccgaccttctctatcgtctgaatgtcgtgacgctggacgtgccccccttg
gccgaccggcgcgaggatatcgcgctgttattcctgcgtctcttggcagaagctgcggcc
cgtcacagggttgataccgtaccagaggttccgcccgcccttttggccaacattgccgcc
cgcgaatggcccggtaacgtgcgcgagctgcgcaacgcagccgatcgcttcgcgctgggt
ttgggcctgcaaaccgatgacgagaaaacacccgcgccgcagcgccttgccgaccgcgtc
gcagccttcgaacggcgcgagatcgaggcggtactggcagccaatggtggctccctcaaa
cccgtctacgaggctcttgggcttagtcggaagtcgctttacgaaaaaatccagaaactt
ggaatcgacaaaacagccttcattctggatgccgaggggcgggatcaggacggatag

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