Roseovarius sp. AK1035: RAK1035_2017
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Entry
RAK1035_2017 CDS
T05517
Name
(GenBank) DNA polymerase II
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rok
Roseovarius sp. AK1035
Pathway
rok03030
DNA replication
rok03430
Mismatch repair
rok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RAK1035_2017
03430 Mismatch repair
RAK1035_2017
03440 Homologous recombination
RAK1035_2017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rok03032
]
RAK1035_2017
03400 DNA repair and recombination proteins [BR:
rok03400
]
RAK1035_2017
Enzymes [BR:
rok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RAK1035_2017
DNA replication proteins [BR:
rok03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RAK1035_2017
DNA repair and recombination proteins [BR:
rok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RAK1035_2017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AWZ20726
LinkDB
All DBs
Position
2080175..2081203
Genome browser
AA seq
342 aa
AA seq
DB search
MKLSPRDAVRYFAKPEAQRTGILIYGADAMRVALRRQEMLAALLGPTADAEMRLTRLPAG
DLRKDPAALLDAVKAQGFFPGPRAAFVEDANDTAADAILAALSDWQAGDAQIIVTAGALK
ATSKIRKAFESHPNAYAVGIYDDPPSREEIEATLARAGLRDVPGPVMADLTALARDLDPG
DFRQTIEKLALYKLGDATPLNAADIAACAPASTEADLDDILNIVAEGRSAEIGPVMRRLK
AQGTQPVGLCIGATRHFRALYTAASDPGGAAQGIARMRPPIFGPRRDRMLRQAQGWGAER
LQQALTILTDTDLTLRSAGQRAPDMALVERALIRLAMLATAR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctcgccgcgcgatgctgtccgctatttcgccaagcctgaggcgcagcgcacc
ggtatcctgatctatggcgcggatgcgatgcgtgtggcgctcaggcggcaagagatgctc
gcggcgctgctcggccctacggcggatgccgaaatgcgcctgacacgtctgcctgcgggc
gacttgcgcaaagacccggccgcgcttttggatgcggtcaaggcgcaggggttctttccc
ggcccgcgcgcggcctttgtcgaggatgccaatgacaccgccgccgatgccattctggcg
gcgctcagcgactggcaggcgggggatgcccagatcatcgtgactgcaggcgcgctcaag
gcgacatcgaaaattcgcaaggcgtttgagagccatcccaatgcctatgcggttggaatc
tatgacgatccccccagccgagaggagattgaggccacattggcccgcgccggtttgcgt
gatgtgccggggccggtcatggccgatctgacggcgctggcgcgcgatcttgatccgggc
gattttcgtcagaccattgagaagctggcgctttataagttgggggacgccacgccgctg
aatgcggcggatatcgccgcctgcgcccctgcctcgaccgaggcggatttggatgacatc
ctcaatatcgtggcagaggggcggtcagccgagattggcccggtgatgcggcggttgaag
gcgcagggcacccagcctgttggcctgtgcatcggggccacgcggcattttcgggcgctc
tataccgctgcgtcggaccccggaggggcggcgcagggcattgcccggatgcgcccgccc
attttcgggccccgtcgcgaccggatgctgcggcaggcgcagggctggggcgcggagcgc
ttgcaacaggcactgacgatcctgacggataccgacctcaccctgcgctccgccggacag
cgcgcgcccgacatggcactggtcgagcgggcactgatccggctggcgatgctggccacg
gcgcggtga
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