Roseovarius sp. AK1035: RAK1035_2113
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Entry
RAK1035_2113 CDS
T05517
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
rok
Roseovarius sp. AK1035
Pathway
rok02020
Two-component system
rok02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RAK1035_2113
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RAK1035_2113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rok03021
]
RAK1035_2113
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
rok02035
]
RAK1035_2113
Transcription machinery [BR:
rok03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RAK1035_2113
Bacterial motility proteins [BR:
rok02035
]
Flagellar system
Flagellar assembly proteins
Stator
RAK1035_2113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
PhyR_sigma-like
HTH_23
HTH_5
DUF1492
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AWZ20822
LinkDB
All DBs
Position
complement(2171906..2172634)
Genome browser
AA seq
242 aa
AA seq
DB search
MIAPQAYAEQQPNPTRLVEQHMPLVQRLAWHFHGRVGRFIEIDDLLQAGYLGLIDASQRY
SVCDGVSFAAYATIRIRGSIIDHLRRNSNLCRNSITMRQKIEATRRKLSQKLGREPEVPE
LAQSLELSTEEFQDWENRFQTNQLQSLDEVYTDHSLLFSDHGSTPEDEVEHIQLKALLQS
ALQDLPERSALVLQLYYVEELNVYEIAAILDVTTGRVSQIKKAAIGQLRDLMQARLHNTA
AE
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccccccaagcctatgcggaacaacagcccaatccgacccgtctggtcgaacag
cacatgccgcttgtgcagcgccttgcgtggcatttccacggtcgcgtgggtcgtttcatc
gagatcgacgacctgctgcaggcaggttatctggggctgatcgacgcctcgcaacgctat
tcggtctgtgatggggtcagctttgccgcctatgcgaccattcgtattcgtggctcgatc
atcgaccatctgcgccgcaattccaacctgtgccgcaactccatcaccatgcgccaaaag
atcgaggccacccgccgcaagctgtcgcaaaagcttgggcgcgaacccgaggtgccggaa
ctggcgcagtcactcgaactttcgaccgaggaattccaggactgggaaaaccgctttcag
accaatcagcttcagtcgctcgacgaggtttataccgatcactcgctgctttttagcgat
catgggtctacccccgaggatgaggttgagcatatccagctcaaggccctgctgcaaagc
gcgctgcaggatctgcccgaacgctcggccttggtgctgcaactctattatgtcgaagag
cttaacgtctatgaaatcgcggcgatccttgatgtcacaaccgggcgcgtatcgcagatc
aaaaaagctgccatcggccagttgcgcgacctgatgcaggcgcggctgcacaacaccgca
gcagagtga
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