Roseovarius sp. AK1035: RAK1035_2288
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Entry
RAK1035_2288 CDS
T05517
Name
(GenBank) Transcription accessory protein (S1 RNA-binding domain)
KO
K06959
protein Tex
Organism
rok
Roseovarius sp. AK1035
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
RAK1035_2288
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Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
S1_RRP5
YqgF
T2SSK
RNase_II_C_S1
HHH_6
OB_RRP5_4th
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
AWZ20996
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Position
2342918..2345245
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AA seq
775 aa
AA seq
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MTDTAERIARIIATEIDARPNQVVAAVGLLDGGATVPFVARYRKEVTGGLDDTQLRNLAE
RLTYLRELEARRVAILNSIKDQGKLTEPLARSIAGAETKAVLEDIYLPFKPKRRTKAMIA
RENGLEPLLRRILAERSAVPEDLAAGYLSESVATVKEALEGARDILAEELTENATLLGRL
REFMRAEAVISARVLPGKEEVGAKFSDYFDHREPWAKIPAHRALAILRAAKEEIVTLDIA
PDPDTGALRAVGMIEATIGIPGNAPGDIWLRSVAAWTWRVKLSLSMYVDLMGELRNRAHD
EAITVFARNLKDLLLAAPAGPRPTLGLDPGIRTGVKAAVVDATGKLIETATLYPFQPKND
LRGAQVAVLEMVRKHGVELIAIGNGTASRETERMVAEALKLLPQGAKRPMSVIVSEAGAS
VYSASELAAKEFPGLDVSLRGAVSIARRLQDPLAELVKITPQSIGVGQYQHDVDQRRLVQ
ALDAVVEDAVNAVGVDLNMASAPLLARVAGLGASLAQAIVAHRDAEGAFPSRKALLKVAG
LGPKAFEQCAGFLRIRDSAEPLDATSVHPEAYGVARRIVQACGRDIRAIMGTPEALNGLR
AEDFVDDKFGLPTVRDILTELEKPGRDPRPSFVTARFADGVDDIKDLKPGMLMEGTVTNV
AAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKVRVTEVDVARKRIGLSMRK
DGAAPETRAKDAPVAARTAKSGKPASAPVRPPKSEPQATQGALGDALRAALRGKS
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
gtgacagacacagccgagcgtatcgcccgaattatcgccactgaaatcgacgcgcgccca
aatcaagtggttgccgcagtggggctgcttgatggcggtgcgacggtgccctttgttgcg
cgctaccgcaaagaggtgacgggtggccttgatgatactcaactgcgcaatctggctgag
cgactgacgtatctgcgcgagttagaggcgcggcgtgtggcgatcctgaattccatcaag
gatcagggcaagctgacagagccgctggcccgctctatcgccggggccgaaaccaaggcg
gtgctcgaggatatctatctgcccttcaagcccaagcgccgcaccaaggcgatgatcgca
cgcgagaacgggttagagccacttttgcgcaggattttggctgagcggtctgcggtgccc
gaggatttggccgcaggatacctgagcgagagcgtggcaacagtgaaagaggcgcttgaa
ggcgcacgcgacattctggccgaggaattgaccgagaatgccaccctcttgggccgtttg
cgcgagttcatgcgcgcagaagcggtgatcagcgctcgtgtgctgccgggcaaggaagag
gtgggggccaagttctcggattacttcgatcatcgagagccttgggcaaagattcccgcg
catcgcgccttggctattctgcgggccgccaaggaagagatcgtgacgctcgatattgcc
cccgatcctgacaccggcgcgctgcgggccgtgggtatgatcgaggcgacaattggcatt
cccggtaacgcgcccggtgatatctggctgcgcagcgttgccgcttggacctggcgggtc
aagctgagcctgtcgatgtatgtcgatctgatgggcgaattgcgcaaccgcgcccatgac
gaggcgatcaccgtgtttgcgcgcaacctcaaggatttgctgttggccgccccggctgga
ccacgcccaaccttgggtctggatccaggtatccgtactggtgtcaaggctgcggtggtg
gatgccacaggcaagctgatcgagactgcaacgctctatccattccagcccaagaacgat
ttgcgcggcgcgcaggtggctgtgctggagatggtgcgcaaacatggcgtcgaattgatc
gccatcggcaatggcactgccagccgcgagaccgagcgtatggtagcggaggcgctaaag
ctcttgccgcaaggggccaagcgcccgatgagcgtgatcgtgtctgaggccggggcgtcg
gtctattccgcctcggaactggcggccaaggaatttccggggctcgatgtcagcttgcgc
ggtgcggtgtcgattgcgcgacggctgcaggatccgttggccgaactggtcaagatcacg
ccgcaatccatcggcgtgggacagtatcagcatgatgtcgatcagcggcgtctggtgcag
gcgctggatgccgtggtcgaggatgcggtgaacgcggttggtgttgatctcaatatggcg
tcggcgccgctacttgcccgcgtggcggggctgggggcgtccttggcgcaggccattgtg
gcgcatcgtgacgctgagggcgcatttccgtcgcgcaaggcactgctcaaagtggcaggg
ctgggccctaaggcgttcgagcaatgcgccgggtttttgcgtatccgggatagtgcggaa
cctctggatgccacctcggttcacccggaggcttatggcgtggcgcgccggatcgtgcag
gcctgtggccgcgacattcgcgccatcatgggcacgcccgaggcgctaaacggtctgcgg
gccgaggatttcgtggatgacaaattcggtctgcccacggttcgagacattctgacagag
ctggagaaacccggccgcgatccgcgcccaagctttgtcaccgcgcgatttgccgatggg
gtggatgatatcaaagacctcaaacccggtatgctgatggagggcacagtgacgaatgtc
gcggcctttggcgcgtttgtcgacattggcgtgcatcaggacgggctggtgcatgtcagc
caattggccgatcggttcgtcaaggacccgcatgaggtggtcaaggcgggcgatgtggtc
aaggtgcgcgtgacagaggttgatgttgcgcgcaaacgcatcggcctgagcatgcgcaaa
gacggcgctgcgcccgagacgcgcgccaaggacgcgccagtggcggccagaactgcgaag
tccggcaaacctgccagcgcgccggtgcggccaccaaaatctgagccgcaggccacgcaa
ggggccctgggcgatgcccttcgcgcagctctgcggggcaaatcctaa
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