Roseovarius sp. AK1035: RAK1035_2779
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Entry
RAK1035_2779 CDS
T05517
Name
(GenBank) NAD-dependent formate dehydrogenase alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rok
Roseovarius sp. AK1035
Pathway
rok00630
Glyoxylate and dicarboxylate metabolism
rok00680
Methane metabolism
rok01100
Metabolic pathways
rok01120
Microbial metabolism in diverse environments
rok01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RAK1035_2779
09102 Energy metabolism
00680 Methane metabolism
RAK1035_2779
Enzymes [BR:
rok01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RAK1035_2779
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_10
Fer4_9
Fer4_Nqo3
Fer4_8
Fer4_6
Fer4_21
Fer4_2
Fer4_17
TetR_C_34
Fer4_16
Fer4_4
Fer4_18
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
AWZ21487
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Position
2866239..2869133
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AA seq
964 aa
AA seq
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MKDFIIPKDRDMGTPAKVGAPVTLEIDGVAVTVPEGTSVLRAAAEAGISIPKLCASDNLE
AFGSCRLCVVEIEGRRGTPASCTTPVTPGMVVHTGSSKVRKIRKGVMELYISDHPLDCLT
CSANGDCELQDMAGAVGLRDVRYEAPKDGGMVNHFEARNTSGEANPEWLPKDDSNPYFSY
DPSKCIVCNRCVRACEEVQGTFALTIQGRGFDSRVSAGNADDDFLASDCVSCGACVQACP
TATLQEKSIIELGTPDRSVVTTCAYCGVGCSFKAEMNGDTLVRMVPYKHGKANRGHSCVK
GRFAYGYAHHNDRILKPMIRERITDPWQEVSWDEALSFAATRLRSLQAQYGKKSIGVITS
SRCTNEETYLVQKLARAVFGNNNTDTCARVCHSPTGYGLGQTFGTSAGTQDFDSVEHTDV
VVVIGANPTDGHPVFASRLKKRLRAGAKLIVIDPRRIDLVKSPHISAAHHLPLRPGTNVA
VVSALAHVIVTEGLMDEDFIRARCDWDEFQHYAEFISNPRHSPEATAMLTGVDPAELRAA
ARLFAHGGNGAIYYGLGVTEHSQGSTTVMGIANLAMLTGNIGRPGVGVNPLRGQNNVQGS
CDMGSFPHELPGYRHVKGPEVRAVFEEAWGVEIDAEPGLRIPNMLDAAVDGTFKGLYCQG
EDILQSDPDTKHVAAGLAAMDCVIVHDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRI
NRVRKVIPPLNGYADWEITQMLANAMGAGWTYSHPARIMEEIAATTPSFAGVDYALLEEK
GSVQWPCNEAHPEGTPLMHVDGFMRGKGRFIVTEYVATDEKTGPRFPLLLTTGRILSQYN
VGAQTRRTANVVWHEEDLLEIHPHDAEVRGLKEGDWVRLASRAGETTLRAMLTDRVSPGV
VYTTFHHPDTQANVITTDYSDWATNCPEYKVTAVQVSLSNGPSDWQEDYAAQAAQARRIL
PAAE
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttcattattcccaaagaccgcgacatgggcacgcccgccaaagtgggagcc
ccggtgacgttggagatcgacggtgttgccgtaaccgtacccgagggcacatcggtgttg
cgcgcagcggccgaggcggggatttccatccccaagctctgcgcctctgataatcttgaa
gcttttggttcttgccgcctctgtgtggtggaaatcgaggggcggcgtggcacgcctgcg
tcctgcacaacgcctgtgacgccgggcatggtggtgcataccggatcgtcaaaggtgcgc
aagatccgcaaaggggtgatggagctctatatctctgatcaccctctcgattgcctgact
tgctctgccaatggcgattgcgagttgcaggatatggccggtgcggtcggtctgcgtgat
gtgcgctacgaggcccccaaggatggcggcatggtcaaccatttcgaggctcggaacacg
agtggcgaggccaatccggaatggttgccaaaggacgacagtaacccgtatttcagctat
gaccccagcaaatgcatcgtctgtaaccgctgtgtgcgtgcctgcgaagaagtgcagggc
acatttgccctgaccattcagggccgtggctttgacagccgcgtatcggcgggtaatgcg
gatgatgatttcctcgcctctgactgtgtgagttgcggggcctgcgtgcaggcctgcccg
acggcgactttgcaggagaaatccatcatcgagctgggcacgcctgatcgctcggttgtc
acgacctgtgcctattgcggcgttggctgttcgttcaaggccgagatgaacggcgacacg
ctggtgcgtatggtgccatataaacacggcaaggccaatcgcgggcattcctgcgtcaaa
gggcgatttgcctatgggtatgcccatcacaacgaccgcatcctaaagcctatgatccgc
gagcggatcactgatccctggcaagaggtcagttgggacgaggcgctcagctttgcagcc
acccgtctgcgcagcttgcaggcgcaatatggcaagaaatctatcggcgtgattacctca
agccgctgcaccaacgaagaaacctatttggtgcagaaactggcgcgcgcagtctttggt
aacaacaataccgacacctgcgcgcgcgtttgtcattcccctacaggatatggcttgggc
cagacgtttggcacctctgccggcacgcaggatttcgactctgtcgaacataccgatgtg
gtggttgtgatcggcgcaaatccgaccgatgggcacccggtttttgcaagccgcctcaaa
aagcggttgcgtgccggtgccaagctgatcgtgattgacccgcgccggattgaccttgtg
aaatcaccgcatatttcggcggcgcatcacctgccgcttcgccccggcaccaatgtggcg
gtggtcagcgcacttgcgcatgtcatcgtgaccgaggggctgatggatgaggacttcatc
cgcgcgcggtgtgattgggatgaatttcagcattacgccgaattcatcagcaacccgcgc
cattcgccagaagcgacagcgatgttgaccggggtcgacccggcggaactgcgcgccgcg
gcccggcttttcgcgcatggtgggaacggggcgatttactatggtcttggcgtaaccgaa
cattcccaaggttcgaccacggtcatgggcattgccaacctcgcgatgctgactggcaat
atcgggcggcccggcgtgggcgtgaaccctctgcgcgggcaaaacaacgtgcagggctct
tgcgacatggggtctttcccgcatgaattgcccggctatcgccatgtcaaagggccagaa
gtgcgcgcagtctttgaagaggcttggggcgtagagattgacgccgagccgggtttgcgc
attcccaacatgctcgatgctgccgtcgatgggacgttcaaggggctgtattgccaaggc
gaggatatcctgcaatcggaccccgacaccaagcatgtggcggcgggtctggctgcgatg
gactgtgtcatcgtgcatgacctcttcctcaacgagactgccaattacgcgcatgtcttc
ctgcccggttcgaccttcttggagaaagacggcaccttcaccaatgccgagcgccgcatc
aaccgcgtgcgcaaggtgatcccgccactcaacggctatgcggattgggaaattacccaa
atgcttgcaaacgccatgggggcagggtggacgtatagccacccggcgcggatcatggag
gaaatcgctgcaacgacgccaagctttgccggggtcgactatgccctgctagaagaaaag
ggcagcgtgcaatggccctgtaacgaagcacatcccgagggcacgccgctgatgcatgta
gatgggttcatgcgcggcaaggggcggttcatcgtcaccgaatatgtggcgactgatgag
aaaaccggcccgcggtttccgctgttgctgaccaccgggcgcatcctcagtcagtataac
gtcggcgcgcagacacggcgcaccgcgaatgtggtctggcacgaagaggatctcttggaa
atccatccgcatgatgccgaggtgcggggtttgaaagagggcgattgggttcgattggcc
agtcgcgcaggcgaaaccaccctgcgggccatgctgacagatcgcgtcagccccggcgtg
gtctacaccacctttcaccatccggatacgcaggccaatgtcataaccaccgattactcg
gactgggccaccaactgtccggaatacaaggtgacggcggttcaggtcagcctgtcgaac
gggccaagtgattggcaagaggattacgccgcgcaggccgcacaggcgcggcgcatcctg
cctgcggcggagtga
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