Roseovarius sp. AK1035: RAK1035_2923
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Entry
RAK1035_2923 CDS
T05517
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rok
Roseovarius sp. AK1035
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rok03400
]
RAK1035_2923
Enzymes [BR:
rok01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RAK1035_2923
DNA repair and recombination proteins [BR:
rok03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RAK1035_2923
Prokaryotic type
RAK1035_2923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AWZ21631
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Position
3017239..3018618
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AA seq
459 aa
AA seq
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MRLADHPALCAALAGGGAVIPVFIHDESVEALGAAPKWRLGLSLASLARDLAACGSRLIL
RRGAALDVLRALVAETGAGAVHWSRLYDPQSIARDKAVKSALREAGVDAQSHPGHVMFEP
WTVETKTGGFYRVYSPMWRAVKDRDVAVPLTAPGQIPAPKVWPASDSLDDWQMGAAMYRG
ADVCLPYQRVGEAAAMERLHAFADGAIAEYQDARNFPAVDATSALSENLTYGEISPRQCW
HAGQRALHGGAKGAETWLKELVWREFAYHLMYHTPHILSGNWRTDWDAFPWSTDADHPEV
IAWKQGRTGEPFVDAAMREMYVTGKMHNRARMIVASYLTKHLMTHWKIGLDWFAECLTDW
DPASNAMGWQWAAGCGPDAAPYFRVFNPETQLDKFDRGGAYTRRWIAEGQRTPPATALDY
FKAVPRAWQLDPSMLYPGRIVDLSQGRQRALNAYEAREF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctggccgatcacccggcactctgcgcagcgcttgcaggcggcggcgcggttatt
cctgttttcatccatgatgagagcgtcgaagctctgggcgctgcaccaaaatggcgtctg
ggcctgtcgctggcgtcgcttgcgcgtgatctggcggcgtgcggcagccgcttgatcctg
cgccggggcgcggcgctggatgtgctgcgtgcgctggtggctgaaaccggggcaggggcg
gtgcactggtcgcggctttatgatccgcagtccatcgcgcgcgacaaggcggttaaatcc
gcgctgcgtgaggcaggggtggacgcacaaagccacccgggccatgtgatgttcgagcct
tggacggttgagaccaagaccggcggcttttaccgcgtttacagcccaatgtggcgcgcg
gtgaaggatcgcgatgtggcggtgccgctgacagcgcccgggcaaatcccggcccccaag
gtttggcccgcctctgacagtctggatgattggcagatgggggccgccatgtatcggggg
gccgacgtgtgcttgccctatcagcgggtgggcgaggccgcggcgatggagcggttgcat
gcctttgccgatggggcgattgcagagtatcaggacgcccggaattttccggcggtcgat
gcaacttctgcgctgtcggaaaacctgacctatggggaaatctcgccgcgccagtgctgg
catgcggggcagcgggccttgcatggcggggccaaaggcgcagagacatggctcaaggaa
ctggtctggcgcgagtttgcctatcacctcatgtatcacacgccccatattctgagcggc
aattggcggaccgattgggatgcctttccatggtccaccgatgcggatcatcccgaggtc
atcgcgtggaaacagggccgcaccggcgaaccctttgtcgatgccgccatgcgcgagatg
tatgtgaccggcaagatgcacaaccgcgcgcggatgatcgtggcctcatacctcaccaag
catctgatgacccattggaagattggcttggactggttcgccgaatgtctgaccgattgg
gatccggcctcgaatgcgatgggctggcaatgggcggcgggctgtgggcccgacgcagcg
ccgtatttccgggtgttcaatcccgagacacagttggacaagttcgaccgtggcggggcc
tatacccggcgctggatcgccgaggggcagcgcaccccacccgccacggccttggattat
ttcaaggcggtgccgcgcgcctggcagcttgatccgtcgatgctttatccggggcggatt
gttgatttgtcacaggggcggcaaagagcgctcaacgcctatgaagcgcgggagttttga
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