Roseovarius sp. AK1035: RAK1035_2978
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Entry
RAK1035_2978 CDS
T05517
Name
(GenBank) Exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
rok
Roseovarius sp. AK1035
Pathway
rok03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RAK1035_2978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rok03400
]
RAK1035_2978
Enzymes [BR:
rok01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RAK1035_2978
DNA repair and recombination proteins [BR:
rok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RAK1035_2978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
TMCO5
DUF601
ARM_TT21_5th
Sec10_N
Motif
Other DBs
NCBI-ProteinID:
AWZ21686
LinkDB
All DBs
Position
3077737..3077979
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AA seq
80 aa
AA seq
DB search
MTDTPPSEMTFEQAMKELEQVVGRLERGDVALDESITLYERGAKLKKRCEEKLKEAEEKV
AAITLDADGQPTGTTPVTGL
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatacgcccccctccgagatgacctttgaacaggcgatgaaagagctggagcag
gttgttgggcggctggaacggggcgatgtggcgctggacgagtcgatcacgctttatgag
cgcggcgccaagctcaagaaacgctgcgaagaaaaactgaaagaggccgaagaaaaagtc
gccgccattacgctcgacgccgatggccagcccaccggcacgaccccggtgacaggtctc
tga
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