Roseovarius sp. AK1035: RAK1035_3528
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Entry
RAK1035_3528 CDS
T05517
Name
(GenBank) Integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
rok
Roseovarius sp. AK1035
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rok03032
]
RAK1035_3528
03036 Chromosome and associated proteins [BR:
rok03036
]
RAK1035_3528
03400 DNA repair and recombination proteins [BR:
rok03400
]
RAK1035_3528
DNA replication proteins [BR:
rok03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RAK1035_3528
Chromosome and associated proteins [BR:
rok03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
RAK1035_3528
DNA repair and recombination proteins [BR:
rok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
RAK1035_3528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AWZ22235
LinkDB
All DBs
Position
complement(3636224..3636505)
Genome browser
AA seq
93 aa
AA seq
DB search
MIRSELIQKIADENPHLYQRDVERIVNTIFNEITDALAEGNRVELRGFGAFSVKKRDART
GRNPRTGESVHVEEKNVPFFKTGKLLRDRLNGK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatccgatcggaactgattcaaaaaatcgctgacgagaacccgcatctttatcagcgc
gacgtcgagcgtatcgtcaacaccatcttcaacgagatcaccgatgcgctggccgagggc
aaccgcgtcgagttgcgcggctttggtgcgttctcggtgaaaaagcgggatgcgcgcacg
ggtcgcaatccacgcaccggtgaaagcgtgcatgttgaagagaaaaacgtgcccttcttc
aagaccggcaagctattgcgtgaccggctcaacggaaagtaa
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integrated database retrieval system
