Roseovarius sp. AK1035: RAK1035_3670
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Entry
RAK1035_3670 CDS
T05517
Name
(GenBank) Protein-export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
rok
Roseovarius sp. AK1035
Pathway
rok02024
Quorum sensing
rok03060
Protein export
rok03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RAK1035_3670
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RAK1035_3670
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RAK1035_3670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rok02044
]
RAK1035_3670
Secretion system [BR:
rok02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RAK1035_3670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
TFX_C
Motif
Other DBs
NCBI-ProteinID:
AWZ22375
LinkDB
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Position
complement(3784742..3787378)
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AA seq
878 aa
AA seq
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MLQIDLWKRLCIWGTVALGLMLALPNGFYGKVERHNDAVVAVEAGADPASVADDLALWPG
WMPSSLVNLGLDLRGGAHLLAEVKVEDVYQARVEGMWPEVRDLLREERDSVGPIRLQQTD
EPELRVRLVERPEMATEAAALVRGLARPVTDVLTGVGGSDIEVTTDGADIIIRLSEAEQR
ATDDRTVRQSLEIIRRRIDEVGTREPTIQRQGADRILIQVPGIGSAAELKALIGTTAQLT
FQPVISRAASADAPAGAGNEVLPSLDEAGVYYILERAPVVTGEELVDAQPDFDQNGRPAV
SFRFNPTGARKFGDYTAENIGNPFAIVLDGEVISAPVIQSHIAGGSGIITGNFNVEDSTQ
LAVLLRAGALPAGLEFLEERTVGPELGADSIEAGKLACLVAFALVLVYMIVSYGIFGIFA
NIALIVNVGLIFGLLSLIGSTLTLPGIAGIVLTIGMAVDANVLVFERIREEMKSAKGAAR
AIELGYEKAMSAIVDANITTFMTALILYVMGSGPVRGFAITLGLGIVTSVFTALFVTRLI
TVMWFERKRPKTVLAGRGFRLVPEITSWDFFSRWKLWLGISGVMILVAFGSFAVQGLNFG
IDFKGGTTIRTLSAEPVDIGAYRAATNDMGLGDVSITEVFDPTFGPEENVAMLRIQAQDE
TESVTPETIAAVEAALQQAVPDIQFTSVESVGPKVSGELIKTAVLAVALAIGAVLVYIWM
RFEWQFAVGAVIALVHDVALTIGVFSELQIQFDLAIIAALLTLVGYSLNDTVVVFDRVRE
NLRKYKQRPLREVLNLSINETLSRTMVTSLTTLLALLALYVLGGDVIRGFVFAMIWGVIV
GTYSSIFVASTVLMWLGIKRDWSKPDANAGTQFANIDA
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaatcgacctgtggaaacgcctctgtatctgggggacggtagcccttggtctg
atgctcgccctgcccaatgggttttacggaaaggtcgagcggcataatgacgccgtcgtc
gccgttgaggcgggggctgatccggcgtcggtggccgatgatctggcgctttggcccggt
tggatgccctcgagccttgtcaatctggggcttgatctgcgcgggggcgcgcatctattg
gccgaggtcaaggtcgaagatgtctatcaggcgcgggttgaggggatgtggcccgaggtg
cgcgatctgttgcgtgaagagcgtgacagcgtggggcccatccggctgcagcagaccgat
gagcccgagttgcgggtgcgccttgtcgagcggcccgaaatggccacagaggccgcggcg
ctggtgcgtgggctggcgcggcctgttaccgatgtgctgactggcgtgggtggcagcgat
atcgaggtgacaacggacggtgcggatatcatcatccggctgagcgaggccgagcagcgc
gcgaccgatgatcgcaccgtgcggcaatcgctggaaatcattcgccgtcggatcgacgag
gtgggcacgcgcgagccgaccatccagcgccagggcgctgaccgcatcctgattcaggtg
ccggggattggcagcgcagccgagttgaaggcgctgatcgggaccacggcccaactgaca
ttccagccggtgatcagccgtgccgcgagcgctgatgcgcccgcgggcgcaggtaacgag
gtgctgccgtcactggacgaggcgggcgtttactacatcctggagcgcgcgcccgttgtg
acgggcgaggaattggtcgatgcacagccagatttcgaccagaacggtcgcccggcggtg
tcgttccggttcaatcccacgggtgcccgcaaattcggcgattatacggctgagaatatc
ggcaatccctttgctatcgtgcttgatggcgaggtgatcagcgcgccggtgatccaaagc
catattgccggcgggtcgggcatcatcaccggcaacttcaatgttgaggacagcacgcaa
ctggccgtgctgttgcgtgcgggtgcgcttccggcggggcttgagtttctggaagagcgg
acggtcgggccggagcttggggccgatagtatcgaggcgggcaagctggcctgtcttgtg
gcctttgcgcttgtgctcgtttacatgatcgtgagttacggcattttcggcatctttgcg
aatattgcgctgattgtgaacgttggtctgattttcggcttgctcagcctaatcgggtct
acgctgaccttgccggggatcgccgggatcgtgctgaccatcgggatggcggtggacgcc
aatgtgctggtgttcgagcgtatccgagaagagatgaaatcggccaagggcgcggcgcgg
gccattgaattgggctatgagaaggcgatgagcgcgattgtcgacgccaacatcaccacc
ttcatgacggcgctgatcctttatgtcatggggtctggtccggtgcgtggctttgccata
acgctggggctggggattgtgacttcggtctttaccgctctgtttgtgacgcgattgatc
acagtgatgtggtttgagcgcaagcggccaaaaacggtgctggccgggcgcggtttccgg
ctcgtgccggaaataacctcttgggatttctttagccggtggaagctgtggctgggcatt
tccggggtgatgatccttgtggcgtttggctcttttgccgtgcaagggctgaatttcggg
attgatttcaagggtggcaccacgatccggacgctcagcgcagaacctgttgatatcggg
gcctatcgcgctgcgactaatgatatggggttgggcgatgtcagcatcacagaggtgttc
gatccaacctttggcccggaagagaacgtggcaatgctccggattcaggcgcaggacgag
accgaaagtgtcacccccgaaacgatcgcggcggtcgaagcggccttgcagcaggctgtg
ccggatatccagttcacatccgtggagagcgttggccccaaagtatcgggcgagttgatc
aagacggcggtgcttgccgtcgcactcgccatcggggcggtgctggtttacatctggatg
cggttcgagtggcaattcgcggtcggggcggtgattgcgttggtgcatgacgtggcgcta
accatcggtgtgttttcggaactgcaaatccaattcgatctcgcgatcatcgcggccctt
ctgacgcttgtcggctactcgcttaacgatacggtggtggtgtttgaccgggtccgcgag
aacctgcgcaaatacaagcaaaggccgctgcgagaggtgctgaacctgtcaatcaacgag
acgctgagccgcacgatggtgacgtcactgaccaccttgctggcgcttttggccttgtat
gtcttggggggtgacgtgatccggggctttgtctttgccatgatctggggcgtgatcgtt
ggcacctattcgtcgatctttgtggccagtacggtgctaatgtggctgggtatcaaacgc
gactggtctaagccggatgccaatgcgggcacgcaattcgccaatatagatgcctga
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