Roseovarius sp. AK1035: RAK1035_3693
Help
Entry
RAK1035_3693 CDS
T05517
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rok
Roseovarius sp. AK1035
Pathway
rok03420
Nucleotide excision repair
rok03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RAK1035_3693
03430 Mismatch repair
RAK1035_3693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rok03400
]
RAK1035_3693
Enzymes [BR:
rok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RAK1035_3693
DNA repair and recombination proteins [BR:
rok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RAK1035_3693
MMR (mismatch excision repair)
Other MMR factors
RAK1035_3693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AWZ22398
LinkDB
All DBs
Position
complement(3814082..3816532)
Genome browser
AA seq
816 aa
AA seq
DB search
MARICAGFQGLVQRPDGGGTIPEHLFISGRLRAIVGGMNRFDESDAFEGASLSARAMAAR
PAPYLDDLNPEQRRAAETLDGPVLMLAGAGTGKTKALTTRIVHLMNTGRAGPGDILAVTF
TNKAAREMKERVGRLLGQPAEGMPWLGTFHSICVKLLRRHAELVDLKSNFTILDTDDQLR
LLKQLVQASGIDDKRWPARMLAGIIDQWKNRAWTPDNLPASEGSAYDGKGPALYHQYQAR
LKELNAVDFGDLLLHVVTIFQRHDDVLRQYQRWFRYILVDEYQDTNVAQYLWLRLLAGGH
KNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAAVIRLEQNYRSTPHILAAASGVIAGN
RDRLGKELWTEAEEGEKLRLIGHWDGEEEARWIGEEIDAMQRGTRGMRPYSLDAMAILVR
ASHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIRDAMAYFRLVVSPSDDLAFERIVNTPK
RGLGDKAQQKIQMTARQHGVPLVEGARLLLDDKGITGKAAGELRLLIDGLGRWGRMVGDA
DISHVELAEMILDESGYTGMWQNDKTPEAPGRLENLKELVKALEGFENLQGFLEHVSLIM
DNEAGEEGEKVTLMTLHAAKGLEFPAVFLPGWEDGLFPSQRSMDESGVRGLEEERRLAYV
GITRAEEVCTISFAGNRRVYGQWQSQMPSRFIDELPEGHVDVLTPPGLYGGGYGAAASSG
IESRAAEANVYNSPGWRRLQARGAERPLSQPSEARHSVIDLQAMSAHTVGERVFHQKFGY
GAIIAIEGDKLEIAFEKAGTKKVVARFITGADDVPF
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcatttgcgcgggttttcaggggcttgtccagaggccagatgggggcggaaca
atccccgaacatctctttatctctggtcgcctccgcgctattgtcgggggcatgaacaga
tttgacgaatccgacgcctttgagggggccagcctctcggcccgtgccatggcggcgcgg
cccgcgccctatcttgatgatctcaaccccgaacagcgccgcgcggcggaaacgctggat
ggtccggtgctgatgctggctggcgcgggcacgggcaagaccaaggcgctgaccacgcgc
atcgtgcatctgatgaacaccgggcgcgcggggcccggcgatatcttggccgtgaccttt
accaacaaggccgcgcgcgagatgaaagagcgtgtgggccgccttttgggtcagccggca
gaggggatgccgtggctgggcacctttcattcgatctgcgtcaaacttttgcgtcggcat
gccgaactggttgatctgaaatcgaatttcaccattcttgataccgacgatcaactgcgc
ctactcaaacaactggtgcaggcgtctggcatcgacgacaaacgctggcccgcgcggatg
ctggcgggaatcatcgaccagtggaaaaaccgcgcttggacgcctgacaatctgcccgcg
tcagagggcagcgcctatgatggcaagggtccggcgctctaccatcagtatcaagcgcga
ctgaaggaattgaatgcggtcgattttggcgatctgctgctgcatgttgtgacaatattc
cagcgccacgatgacgtgctcaggcaataccaacgctggttccgctatatcctcgtggac
gagtatcaggataccaacgtcgcgcaatatctctggctgcggcttttggctggggggcac
aagaacatctgctgcgtgggcgatgatgatcagtcgatctatggctggcgcggggccgaa
gtgggcaatatcctgcggttcgaaaaggattttcccggtgcggcggtgatccggcttgaa
cagaattaccgttcgacgccgcatattctcgccgctgcttctggtgtgatcgcgggaaat
cgcgaccggcttggcaaagagttgtggaccgaggctgaagagggagaaaagctccgcctg
atcggccattgggatggcgaggaagaggcgcgctggattggcgaagaaatcgacgcgatg
caacgcgggacgcggggcatgcggccctattcgcttgacgcaatggcaatcctcgtgcgg
gccagccaccagatgcgcgccttcgaggatcggtttctgaccatcggtctgccctaccgc
gtgatcggcggcccgcgcttttacgagcgtttggaaattcgcgatgccatggcctatttc
cgccttgtggtctcgccttcggatgatttggcctttgagcggatcgtcaacacgcccaag
cgcgggttgggtgacaaggcgcagcagaaaatccagatgaccgcgcgccagcatggtgtg
ccattggtcgaaggcgcgcgccttttgcttgacgacaaggggatcaccggcaaggcggcg
ggcgagctgcgccttttgatcgacgggcttggccgttggggccggatggtgggcgatgcc
gatatcagccatgtcgaactggcggagatgatccttgacgagagcggctataccggcatg
tggcaaaacgacaagacgcccgaggcaccggggcggcttgaaaacctcaaggaactggtc
aaggccctcgaagggttcgagaacctgcaagggtttttggaacacgtgagcctcatcatg
gataatgaggcgggtgaagagggcgagaaggtcacgctgatgaccttgcacgcggccaaa
gggctcgagtttccggccgtgttcctgccgggatgggaagatgggcttttcccctcgcaa
cgctcgatggacgaaagcggcgtgcggggattggaagaggagcggcggctggcctatgtc
ggcatcacccgtgccgaagaggtctgtacgatttcattcgcgggcaatcgccgggtctat
ggccagtggcagagccagatgccatcacgcttcattgacgaattgcctgaggggcatgtt
gatgttctgacccctccgggcctttatggcgggggctatggggcggcggccagttcaggc
atcgagagccgcgccgccgaagccaatgtctacaatagccccggttggcgacggcttcag
gcgcggggcgcggagcggcccctgagccaacccagtgaagcgcgccacagcgtgatcgac
ctgcaggcgatgagtgcgcacacagtgggcgagcgcgtctttcatcaaaagttcggctat
ggcgcaatcatcgccatcgagggcgacaagctcgaaatcgcgtttgagaaggcgggcacc
aaaaaggttgttgcccgtttcatcacgggcgcggatgacgttccgttctag
DBGET
integrated database retrieval system
