Roseovarius sp. AK1035: RAK1035_3790
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Entry
RAK1035_3790 CDS
T05517
Name
(GenBank) putative ATP-binding/permease fusion ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
rok
Roseovarius sp. AK1035
Pathway
rok02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RAK1035_3790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rok02000
]
RAK1035_3790
02044 Secretion system [BR:
rok02044
]
RAK1035_3790
Transporters [BR:
rok02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
RAK1035_3790
Secretion system [BR:
rok02044
]
Type I secretion system
Adhesin protein transporter
RAK1035_3790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
ATP-synt_I
AAA_29
AAA_25
NACHT
FtsK_SpoIIIE
DUF87
Motif
Other DBs
NCBI-ProteinID:
AWZ22495
LinkDB
All DBs
Position
complement(3912086..3914302)
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AA seq
738 aa
AA seq
DB search
MTKAPVALTITTGARGGEASGPQPAPARFGERAVARAKLGVAYAALLGIEAVERDILEAM
IASKAGGGPTDQPQPRALADGLEAAGLMARVEPVAHPHPDQWPALAQMTSGQFVLVLSQA
GSVLTIHDTTCADQRAEVPLAEFEPFFTGLVVRADAPVQSLSRAHDAPEAAPHWFWSQFA
GFRRHIAEVALGSFVANILAVAVALFALQVYDRVIPHQSEATLWVLAAGAGLALVMEAAL
KIARAQLMDGAGRQIELNVQRILMDRILGMRSEIASKSPSQIFSAMREFGSVREFFTVST
IGTLTDLPFIVVFLALVASIAGNVVWVLILGGVIMVLPGFLLQRRMMRLTQEMQGASARG
ARLLHEAIFELDTLKTQRAEERFRRIWGELTALQAIKSSEQRRLGSVLSFWAQAVQQATY
IVAVILGSYLVFAGEFTVGSIIAVGILTSRTLGPLTQLSSTLARWGNVKSALVGLDAIAL
ADQDEGEGRSYLRRTALTGAYELREVQFAYDAGGAPVLDIPGLIIQPGQVVAVLGTNGSG
KSTFLKLLSGLYAPSRGRLMLDGTDMGQIAPRDLRRMIGYLGQDVRLFTGSLRENLNLTL
LERDDARLMQALDFAGLGPFVRGHPKGLDLEILDGGQGLSQGQRQSIGWARLWLQDPAVC
LLDEPTAALDQTLERTLVSRLETWLKGRTAVIATHRMPILSLTSRTLILQAGRMAVDGPR
DQVLAHLAQAAGTGPGGA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaaggcccccgtcgccctgacgatcacgaccggcgcgcgcgggggtgaggcaagt
ggcccacaacctgcgccagcgcggtttggtgagcgggctgtggcgcgggcgaaactgggg
gtggcctatgccgcgcttttgggtatcgaagcggtcgagcgcgatattctggaggcgatg
atcgcgagcaaggcggggggtggccctactgaccagccgcaaccgcgcgccctggccgat
gggttggaggcggcggggctgatggcgcgggtcgagccggtggcgcatccgcatcctgat
caatggccggcgctggcgcagatgacgagcgggcaattcgtgctggtgctgtcacaggcg
ggcagcgtgttgacgatccacgacaccacctgcgccgatcagcgcgccgaggtgccgctg
gccgagttcgagccgttctttaccggccttgtggtgcgggccgatgccccggtgcaaagc
ctgagccgcgcgcatgatgcgcccgaggccgcgccgcattggttctggagccagtttgcc
gggttccggcggcatatcgcagaagtggcgcttggctctttcgtggccaatattctggcg
gtggcggtcgcgctttttgcgcttcaggtttacgaccgggtgatcccgcatcaatccgag
gcgacgctgtgggtattggcggcgggggcgggtcttgcgctggtgatggaagccgcgctg
aaaattgcgcgggcgcagttgatggacggggccgggcggcagatcgaactcaatgtgcag
cgaattctgatggaccgtattcttgggatgcggtccgagattgcgagcaagagcccgtcg
cagatattctcggcgatgcgggaattcggatcggtgcgtgaattctttaccgtctcgacc
attggcacgctgacggatttgccgttcatcgtggtgtttctggcgctggtggcgtcgatt
gcgggcaatgtggtttgggtcttgatcctgggcggggtgatcatggttctgcccggtttc
ctgctgcaacgccggatgatgcggctgacgcaagagatgcagggggcgagcgcgcggggg
gcgcggctgttgcatgaggcgatattcgagcttgatacgctcaagacgcagcgggccgag
gaacggtttcgccggatttggggcgagttgacggcgcttcaggcgatcaagtcgagcgag
cagcggcggctgggatcagtgctgagtttctgggcgcaggcggtgcagcaggcgacctat
atcgtggcggtgatccttggctcttatctggtgttcgcgggcgaattcactgtgggttcg
atcatcgccgtggggattctgaccagccgcacactggggccgctgacgcagctttcgagc
acgctggcacgctggggcaatgtgaaatcggcgctggtggggctggatgcgattgcgctg
gcggatcaggacgagggcgaggggcgcagctatttgcggcgcacggcgttgaccggcgcc
tatgagctgcgcgaggtgcagtttgcctatgacgcaggcggagcgccggtgctggatatt
ccggggttgatcattcagcccggtcaggtggtggcggtgctgggcaccaacgggtctggc
aaatcgacctttctcaagctcttgtcggggctttatgccccaagccgggggcgattgatg
ctggatggcaccgatatggggcagatcgcgccgcgcgatttgcggcggatgattggctat
ctggggcaggatgtgcggctgttcaccggcagcctgcgcgagaacctgaacctgaccttg
ctggagcgcgatgacgcgcggctgatgcaggcgctggattttgccggtttggggcccttt
gtgcgcggtcatcccaaggggttggacctcgagatactggacggtggtcaagggctgagc
caagggcagcggcagagcattggctgggcgcggctatggttgcaggacccggcggtgtgc
ctgttggacgagccgacggcggcgctggatcagacgctggagcgcacgctggtcagccgg
ttggagacatggctgaaggggcgcacggcggtgatcgcgacgcaccggatgccgatcctg
agcctgacaagccggacacttattctgcaagccgggcggatggcggtggacgggccgcgc
gatcaggtgctggcgcatctggcgcaggcggcaggcaccgggccgggaggggcatga
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