Rosistilla oblonga: CA51_01080
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Entry
CA51_01080 CDS
T06941
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rol
Rosistilla oblonga
Pathway
rol03420
Nucleotide excision repair
rol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CA51_01080 (pcrA_1)
03430 Mismatch repair
CA51_01080 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rol03400
]
CA51_01080 (pcrA_1)
Enzymes [BR:
rol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CA51_01080 (pcrA_1)
DNA repair and recombination proteins [BR:
rol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CA51_01080 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
CA51_01080 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_16
AAA_12
eIF3_p135
DEAD
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QDV10266
LinkDB
All DBs
Position
147467..149782
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AA seq
771 aa
AA seq
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MDLILDNLTDPQRAAVTHMDGPMLMLAGPGSGKTRVVTHRIAHLLREGVPASQILALTFT
NKAAEEMLARVQQLAPGEPVWMSTFHRFCARMLRQYSSLVGLQENYSIYDMADAKATMKR
AIEVSGISLSHTSPDQIANAISHFKNQLLTPESMEGANLPAGKMLAAKVYPYYQQLLLVA
NAVDFDCMLLHVARMLRENPELREALDSRFRYIMVDEYQDTNLAQYAIVRSLSVVHQNLA
VTGDPDQSIYGWRGANLNNILDFENDYPQVKTVRLEQNYRSTPNILRVADQLITNNTRRK
HKGLYTHNPEGAAVRLRIYANGYQEADDIADQIVEQIQNHGRSPKDFAILCRMNYLTRSL
EHSLRSRVVPYTIVRGVEFYQRKEIKDLLSYLQLINNPANDAALSRIVNTPARGIGKTTM
DRVMLFAARHRIPLFEAICRCDEIESIKPRTRGLLKRFVGIIDALSRKASSSLEDLLRFV
LEQTQYSDYLRFSTVEGEDNDALANVDELVSAAVEFDRQHPDDGSLETFLEQVALISDTD
AWEESSDRVTLMTLHAAKGLEFPCVYIIGVEDQVLPHHRSHDDPMQFEEERRLLFVGITR
AEQTLQLSMAKLRSARGSMRPAAASPFLLELPREEMQVIDAHQPTQYGDDNDFDVDVEYP
EAWDMHADHDDDLNQLPPEERTPETTSTPRTAPIASVTTAAQMLEQQMANTIDPEIYTVG
MIVSHPEYGSGRIQSLSGSGGKRTATVNFFVDSIERRFRLSHAQLTPESED
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggacttaattctcgacaacttgaccgacccgcagcgagccgcggtcacgcacatggat
ggtccgatgttgatgctcgctggccccggcagcggcaagacccgcgtggtcactcatcgg
atcgcgcatctgttgcgggaaggagtccccgcgtcgcagatcctggcgttgacgttcacc
aacaaagcggcggaggagatgttggcccgcgtccaacaactcgctcccggcgaaccggtt
tggatgagtacgtttcaccgcttttgcgctcgcatgctgcgacaatattcgtcgctggtc
gggctgcaagagaactattcgatctacgacatggccgacgccaaggcgacgatgaagcgg
gcgatcgaggtctcggggatctcgctgagtcacacgtcgcccgatcagatcgccaacgcg
atcagccacttcaaaaatcaattgctgacgcccgagtcgatggaaggggcgaatttgccg
gcgggtaaaatgctcgccgccaaggtttatccttattaccaacagttgctgttggtcgcc
aacgccgtcgatttcgattgcatgctgctgcacgtcgcccggatgttgcgcgagaacccc
gaattgcgcgaagccttggattcgcggttccgctacatcatggtcgacgaatatcaggac
accaacctagcgcaatatgcgatcgtccgttcgctgtcggtcgtccaccagaatctggcg
gtgacgggcgatcccgaccagtcgatctacggttggcgtggagcgaatctgaacaacatc
ctcgactttgaaaacgattacccgcaagtcaagaccgttcggctggaacagaactaccgc
agcacgcccaacattctgcgggtggccgatcaattgatcaccaacaacacccgccgcaag
cacaaggggttgtacacgcacaatcccgaaggagcggcggtgcggttgcggatctacgcc
aacggttatcaggaagcggacgacatcgccgatcagatcgtcgaacagatccagaatcac
ggccgcagtccgaaggactttgcgatcctgtgccggatgaattatctgacccgttcgttg
gaacattcgctccgctcccgcgtcgtcccctacacgatcgttcggggcgtcgagttctat
cagcggaaagagatcaaggatctgctctcctatctgcaactgatcaacaacccagccaac
gacgctgcgctgtcgcggatcgtcaacacgccggctcgcgggatcggcaagacgacgatg
gaccgagtgatgttgttcgccgctcggcaccggattccgctgttcgaagcgatctgccgc
tgcgatgaaatcgaatcgatcaaaccgcgaacccgtgggctgttgaaacgttttgtcgga
atcatcgacgcgctcagccggaaggcttcgtccagcctcgaggatctgttgcggttcgtg
ttggagcaaacgcagtacagcgattacctgcggttttcgacagtcgaaggagaggataac
gacgcgcttgcgaacgtcgacgaattggtttccgccgccgtcgaattcgatcgccagcat
cccgacgatggatcgctggaaaccttcctggagcaggtggcgttgatctccgataccgat
gcgtgggaagaatcgagcgatcgcgtgacgctgatgacgctgcacgccgccaaggggctc
gaattcccttgcgtctatatcatcggcgtcgaggatcaagtgctgccgcaccatcgcagc
cacgatgatccgatgcagtttgaagaggagcggcggttgctgttcgtggggatcacgcga
gctgaacagacgctgcagttgagcatggccaagctgcgatcggcccgcggtagcatgcgt
cccgccgcggccagcccattcctgctggaactgcctcgtgaagagatgcaggtgatcgac
gcccatcaaccgacgcaatacggcgacgacaacgatttcgatgtcgacgtcgaatatccc
gaggcatgggatatgcacgctgatcacgacgacgatctgaatcaattgccgcccgaagaa
cggacgcccgaaaccacctccaccccgcgaaccgctccgatcgcgtcggtcacgaccgcc
gcccaaatgctcgaacagcagatggccaacacgatcgatcccgagatctatacggtaggg
atgatcgtcagccatcccgaatacggcagcggccggatccagagtctgtcgggttcggga
ggcaagcggacggcaactgtcaacttctttgtcgacagcatcgaacgccgcttccgactc
tcccacgcccaactgacgcccgaaagcgaagattag
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