Rosistilla oblonga: CA51_04550
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Entry
CA51_04550 CDS
T06941
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
rol
Rosistilla oblonga
Brite
KEGG Orthology (KO) [BR:
rol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rol03016
]
CA51_04550 (truD)
Enzymes [BR:
rol01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CA51_04550 (truD)
Transfer RNA biogenesis [BR:
rol03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CA51_04550 (truD)
Prokaryotic type
CA51_04550 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
bDLD3
Motif
Other DBs
NCBI-ProteinID:
QDV10605
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All DBs
Position
612530..613552
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AA seq
340 aa
AA seq
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MNPIDPPRLLGPSLGSVIFKSQPEDFEVEELLRFEPSGEGEHCLVWLEKRHRNTNDVASE
LATKLGLRKRLISHCGLKDKEAVTRQWFSLHLPGKPSPSAEDLTVEGVRVLRIVRHLRKL
HRGAHDGNRFWIRLRGCEFSKEAAAARWQQMIDRGVPNYFGTQRFGRDGGNVPQALRWFK
DEIQVRDRMLRGILLSAARSYLFNACVGHRVLDGTWDTPLSGDVFGFADNRSLVLPHNLH
GDEADRVRQGALELTAPLWGEGELQSQAAVKAMEEQVVAAYPELLAGLAQFNLRQERRVM
RLRPLSAELTWESDSTLVLRFDLPKGTYATTLLRELVDIG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgatcgatcctccccgtctgctgggtccctcgttgggatcggtgatcttcaag
tcgcagccggaggactttgaggtcgaagaactgcttcgcttcgaaccatcgggcgaaggg
gaacattgtctggtttggttggagaagcggcatcgcaataccaacgatgtcgcgtcagaa
ctggcgaccaagctggggctgcgaaagcggttgatcagccactgcggcttgaaggacaaa
gaggcggtgacgcggcagtggtttagtctgcatctacccggaaagccgtcgccgtcggcc
gaggatttgacggtcgaaggggttcgcgtgttgcggatcgtgcgccacttgcgcaagctg
caccgcggcgcgcacgatggcaatcgcttttggatccgattgcgaggctgtgagttctcc
aaggaagccgccgccgcgcgatggcagcagatgatcgaccgtggcgttccgaactacttt
ggcacccagcggtttggccgcgacggtgggaacgtgccacaggcgctgcgatggttcaag
gacgagatccaagtccgcgatcggatgctgcgtgggatcctgttgtccgccgcccgcagc
tatctgttcaacgcctgcgtcggtcaccgcgtgctcgacgggacatgggatacgccgctg
tcgggcgacgtgtttgggttcgccgacaatcgcagcctcgtcctgccgcacaatctgcat
ggcgatgaagccgatcgagtacggcagggagctctggagttaaccgctccgctatggggc
gaaggggagctgcagagccaagccgcagtcaaagcgatggaagagcaagtcgtcgctgcc
tatcccgagctgttggccggtttggctcagttcaatctgcggcaagagcggcgtgtgatg
cggctgcgcccactgtcggcggaactgacctgggagtccgattcgacactcgtgctgcgg
ttcgatcttcccaaaggaacctacgccacgacgctgctgcgcgagttggtcgatattggt
taa
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