Rosistilla oblonga: CA51_05050
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Entry
CA51_05050 CDS
T06941
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
rol
Rosistilla oblonga
Pathway
rol02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rol00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CA51_05050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
Dockerin_1
SdrD_B
Cadherin_3
Planc_extracel
SpaA
Motif
Other DBs
NCBI-ProteinID:
QDV10655
LinkDB
All DBs
Position
complement(674407..679065)
Genome browser
AA seq
1552 aa
AA seq
DB search
MNQLRQRFLKSRKKNSSRQRRKLFGEALEGRRLLAADIAVPMDGLNPHHNYIFGTDTNRD
YQTTAVDALIVINRLNSASASASGELGSTNEDGVFPDVNNDGLITPIDALNIINTINRGE
GELAAVLKLSLDVSQDNQSLLRDTGASTTANPMTTRDFELEVGEKFNLEVRWTHFGNDPF
SKPLGAFTVYADILANNKDVFAPVLSETQILTISENLVDARSGNFELSFPGGDTATVSLA
DVAANGFENALASGIEEAGNFESGSISVFPSGVRSTREQNEETGVGDPYQFVVRYNGDNE
EFQNIPALNVVANFSDAGGQALTIDATTAEIPVYLNNNQADGLNPDAFRYNIDFRSSNLN
ESALYTSSPSGNYTLTGDGNPDGDDVIFDEVGGFSNNISPGGLPTIVPNPNQYNGQDFEA
YSLELVVVQPGDVTFSLNMPDLVGNQLTVFGSDEALTEDGLVEIDLSENGEGLVRGTFVA
PPQDITIGADSITAVEDTARTFDPVANDTEINGGTLTLKSTDGFTQPTNGTVTRDGSTNT
LTYTPDANYNGPDSFTYTVVNSEGVEATGVVSITVSAVNDPPTAVNDSGTGLTTPETDSL
TITAARLLANDLKGPANESSQTLTVTGVSSTSSKGASVSFNSSTSEILYTPLSGELGNDT
FTYTISDGAGGTATGTVTVNVTDVNTPPVAVNDTIAVTEDVPLTIDVSDLLANDSDDNNI
LSIASVTAGSGASAGSVVLNSGAGTITYTPAANVFGSNADSFTYTLTDGVNPGVTATVRV
NITGVNDAPVATDDALTVDEGLTPRTLDVLDNDNAGPGEGTSVTITDVTALPAGAGTIAI
AGDGQSLIYTAPSANYVNTAIDFSYTIQDSEGLSATADVTLSVVPTVRPRAIPDVVNINE
DSGAIDINVLSNDLGNVGESVTLESIDTTGFPAAAGTLAIDDNGTATKTDDVVTFTPAED
YFSTSGLTFTYTISDTSGDDSAAAAIGANTATVTINVASVNDKPVFGADGLFQIDEDETF
TLPASVLANDSAGPANEQQTLAISAVAATSAAGGTVTLDGGVVTFQPAADYHGNDSFTYT
ISDGVDTTTATASFSIASINDAPNLQPVTQLTQGSEAITLDRSTLLSGATPGPADESSQT
LTIFAVSNGGTTSGGGTVVLNADQSVTYTPVAGFSGTDTFEISVRDNGSPSEFSIATVSI
TNNAAPVVGNDTVSTYKGLTKTILVSDLLANDSDAEGDTLTITSITQPSVGSATLSADGT
TITLTTPSETSAEETSFTYTVTDSFSDRVGTVAVEILPFQPSTISGSVYVDQANGSEPNG
SQDEGEVGLGAVWVTLTQEGSAPQSVLSDAYGNFVFENVAPGDYTLSYAPPSGVVDSASN
PNSISLSIAPAGGETYADISFTADSFNATAGNTLDRYIGSYLMALQRANPSMTTADLDAL
AQQGIVFGLNTSGDMTFMYVKGGSGFDSTAAISATLSEDGNQLELTKLYADGRVSDPVII
QRALFISVADPDTGDTVIRVLGNVNFVPSITAEGEADFSDYTQAVDQIFGGL
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaattgcgccaacggtttttgaagtcacgcaaaaaaaacagcagccgtcagcgg
cgcaaattgtttggtgaggcgttggaaggtcggcgattgctggctgccgacatcgcggta
ccgatggatggtctgaatccgcaccacaactacatctttggtaccgataccaatcgggat
taccaaacgactgcggtcgacgctctgatcgtgatcaatcgcctgaattcggccagcgcg
tcggctagcggcgaactgggatcgaccaacgaagatggcgtcttccccgacgtcaacaac
gacggtttgatcacaccgatcgatgcgttgaacatcatcaacacgatcaatcgtggcgaa
ggcgaactggcggcggtattaaagctttcgctggacgtctcccaagacaaccaatcgctg
cttcgcgatacgggagcgtcgacgactgccaatccgatgacgactcgagattttgaactc
gaggtcggtgagaagttcaatctggaagtccgttggactcacttcggtaacgatcccttc
tcgaaacctttgggcgcgttcaccgtctacgccgacatcttggcgaacaacaaagacgtc
ttcgcaccggtattaagcgaaacgcagatcctgacgatctccgagaaccttgtcgatgct
cgatcgggcaacttcgaactcagcttccctggcggcgataccgccacggttagcttggca
gacgttgctgccaacggattcgaaaacgctctggccagcggcatcgaagaagctggcaac
ttcgaatcgggcagcatcagcgtcttcccgagtggcgtgcgatcgacccgcgagcaaaat
gaagagacgggtgttggcgatccgtaccaatttgtcgtccgttacaacggtgacaacgaa
gagtttcaaaatatccccgcactcaacgtcgtagccaacttctccgacgctggaggccag
gcgctcaccatcgacgcgaccacggccgagatccccgtctacctaaacaacaaccaagcc
gacgggctcaaccccgacgccttccgctacaacatcgacttccgttcgtcgaacctgaac
gaaagcgctctttacacttccagccccagcggcaactacacgctcaccggcgatggaaat
cccgacggcgacgatgtgatcttcgacgaagtcggcggattctccaacaacatctctccc
ggtggcctgccgaccatcgtccctaatcccaaccaatacaacggccaggatttcgaagcc
tacagcctggaacttgtggttgttcaaccgggcgacgtcaccttcagcctgaacatgccc
gatctggtcggcaaccaactgacagtcttcggaagcgacgaagctttgaccgaagacggc
cttgtcgagatcgacctctcggaaaatggcgagggtttggtccgcggtacttttgtagct
cctccgcaagacatcacgatcggcgccgatagcatcaccgccgtcgaggacacagcaaga
accttcgacccggtcgccaacgacaccgagatcaacgggggcacgctgaccctgaaatcg
acagacggtttcactcagccgaccaacggtaccgttacccgcgatggctctaccaacacc
ctgacatacactcccgacgcaaactacaacggccccgacagcttcacttacaccgtcgtc
aacagcgaaggtgtcgaagcgacaggcgtcgtttcgatcaccgtctccgccgtcaacgat
cctcccaccgccgtcaacgattcgggcactggcctgacgactccggaaaccgattcgctg
acgatcaccgccgctcgcctgctggccaacgacctcaagggccccgcaaacgaatcgagc
caaactctgaccgtcacgggcgtatcgtccacgtcgtccaagggagcatcggtttcgttt
aactcatcgacttccgagatcctctacacgcctctcagcggtgaactgggcaacgacacc
ttcacctacacgatcagcgatggcgctggcggaaccgcgaccggaaccgtcaccgtcaac
gtgaccgacgtcaacacgccgccggtcgctgtgaacgacacgatcgcagtaaccgaagac
gtgccgttgacgatcgacgtatccgatctgttggccaacgattcggacgacaacaacatc
ctcagcatcgctagcgtcaccgccggatcgggcgcatccgctggcagcgtcgtgctcaac
tcgggtgctggcacaatcacctacacccccgctgcaaacgtcttcggcagcaacgccgat
tcgttcacctacactctgaccgatggtgtgaacccaggcgtcacggcgaccgttcgagtg
aacatcaccggtgtcaacgacgctcccgtagcgaccgacgacgccttgactgtcgacgaa
ggcctgacgccacgaacgctggacgtgctggacaacgacaacgcgggccccggcgaagga
acctcggtcacgatcaccgacgtcaccgcattgcctgcgggtgccggcaccatcgcgatc
gctggcgacggccaatcgctgatctacaccgctccatcggccaactacgtcaacaccgcg
atcgacttcagctacacgatccaggacagcgagggactctcggcaaccgccgatgtcacg
ttgagcgttgtcccaacggtccgcccacgtgcgatcccagacgtcgtgaacatcaacgaa
gattctggagcgatcgacatcaacgtgctgtcgaacgatctgggcaacgtcggtgaatcg
gtaacgctcgagtcgatcgacaccaccggattccctgccgcggcgggaacgctggcgatc
gatgacaacggcaccgcgacgaagaccgacgacgtcgtcaccttcactccggcggaagac
tacttcagcaccagcgggctgacattcacctacacgatcagcgacaccagcggcgacgat
tccgcagccgcagcgattggtgccaacaccgcaaccgtcacgatcaacgtggcttcggtc
aacgacaaaccagtctttggtgctgacggattgttccaaatcgacgaagacgaaaccttc
acgctgccagccagcgttttggcaaacgattcggcaggccctgcgaacgagcagcaaacg
cttgcgatctcggctgtcgcagccacttcggctgcgggcggcacggtcacgctcgacggt
ggcgtcgtcaccttccaaccggctgccgactaccacggcaacgactcgttcacctacacg
atcagcgacggcgtcgacacgacgacggcaacggccagcttctcgatcgcttcgatcaac
gacgcaccgaacctgcaacccgtcactcagctgacccaaggttccgaagcgatcacgttg
gaccgcagcacattgctgagcggtgcgaccccgggaccagccgacgaatcgagccaaacg
ttgacgatcttcgcggtcagcaacggaggcacaacctccggcggcggcaccgtggtcctc
aacgccgatcaatcggtcacctacacaccagtcgcaggtttctcgggaaccgacacgttc
gaaatctcggttcgcgacaacggatcgcctagcgaattttcgatcgcaacggtttcgatc
accaacaacgcggctccagttgtcggcaacgacaccgtctcgacctacaagggtctgacc
aaaacgatcctcgtcagcgacctgttggcaaacgattcggatgccgagggagacacgctg
acgatcacatcgatcactcagccgtcggttggctctgccactctcagtgccgacggaacg
acgatcacgttgacgactccttcggaaacatccgctgaagagacttcgtttacctacact
gtcaccgattcgttctccgaccgcgtcggcaccgtcgccgtcgagatcctgccattccaa
ccgagcacgatcagcggatcggtttacgtcgaccaagccaacggcagcgaacccaacggc
tcgcaggatgaaggcgaagttggactcggtgcggtttgggtgactctgacccaagagggc
tccgctccacaatcggtcctctccgacgcgtacggtaacttcgtcttcgagaacgtcgct
cccggcgactacacactctcctacgctcctccatcgggcgtcgtcgatagtgcctcgaat
ccgaacagcatctcgctgtcgattgctccagcaggtggcgaaacctacgccgacatctcc
ttcaccgccgacagcttcaacgcaaccgctggcaacacgctggaccgttatatcggcagc
tacttgatggcgttgcaacgtgctaaccccagcatgaccacagccgacctcgacgcgttg
gctcagcagggaatcgtgtttggcctcaacaccagcggcgacatgacgttcatgtacgtc
aagggtggcagcggcttcgacagcaccgcagcgatctcggcgacgttgagcgaagatggc
aaccagttggaattgaccaaactgtacgccgacggccgcgtgtcggatccggttatcatc
caacgagccctgttcatctcggtcgcagatcccgacaccggcgatacggtgattcgcgtt
ctcggcaacgtgaactttgtccccagcatcactgctgaaggggaagctgatttcagcgac
tacacccaagccgtcgaccagatctttggcggcctgtag
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integrated database retrieval system
