Rosistilla oblonga: CA51_06070
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Entry
CA51_06070 CDS
T06941
Symbol
sigA_1
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
rol
Rosistilla oblonga
Pathway
rol02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rol00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CA51_06070 (sigA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rol03021
]
CA51_06070 (sigA_1)
Transcription machinery [BR:
rol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CA51_06070 (sigA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_15
Motif
Other DBs
NCBI-ProteinID:
QDV10753
LinkDB
All DBs
Position
complement(824937..826247)
Genome browser
AA seq
436 aa
AA seq
DB search
MEKTYRQGGGGWINRSPISSGRHFPNDSEGVTEYFAAVSRTELLTPEEEVLATQRIKRTR
NAYRRAMLADASIIASIADVFNEATQSNHRIDAIIDVAPHDRTRVALLRRALPVATQSLL
RFDHENSLDQKITASRQTSRKRRVAALHRVRHRIRVCRRLVNDLPLRLEVLEQAYETASR
GESTSAMQTNRRRVQALRQSLLQQKREFVSHHLRLVIPIAKGYRGRGLGFSDLIQEGNAG
LMRGIEKFDPDRGFRFSTYATWWIRQAISRAVTTHARAVRIPTAVLTGVRDVRQASELFV
HAHHRQPTVDELAKLTGVSVDKAHRTREAMRETVSIDDSNAMQRQSIAELLHDSSQASDP
TAGLEREEIDRTVQMVLDALLPRERRVVELRYGMDDGSPKTLLQVSQAMSLSRERIRQIQ
STAIAKMRDVAEQIDD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacataccgacagggcggtggcggttggataaaccggtcgccgatctcctct
ggccgacacttccccaacgatagcgaaggggttaccgaatactttgcagccgtctcgcgg
accgaactattgacgcccgaagaggaggttctggcaacgcagcggatcaagcggacgcgg
aatgcgtaccgccgcgcgatgctagccgacgcttcgatcatcgcgtcgatcgccgacgtc
tttaacgaggcgacgcagagcaaccaccgcatcgatgcgatcatcgacgtcgcgcctcat
gatcggacacgtgtcgcgttattgcgacgcgcgttgcccgtggcaactcaatcgctgctt
cgcttcgatcacgaaaacagcttggaccaaaaaataactgcctcgcggcaaacgtctcga
aaacgacgcgtcgcggcactgcatcgggtgcggcatcgcattcgcgtctgtcgccgattg
gtcaacgacctgccgctgcgattggaggtgctcgaacaagcctacgagacggcgtcgcgc
ggcgaaagcacttcggcgatgcaaaccaatcgacgccgagtccaagcgctgcgtcaatcg
ctgctgcaacagaagcgggaatttgtcagccaccacttgcgactggtgatcccgatcgcg
aagggctaccgaggccgcgggctcggattttccgacctgatccaggaagggaacgccggc
ctgatgcgagggatcgaaaagtttgatcccgaccgcggcttccgcttcagcacttacgcc
acgtggtggatccggcaagcgatctcccgcgccgtgacgactcatgcccgagcggttcgg
atcccgaccgccgtcctgaccggcgtccgcgatgttcgacaggcgagcgagctgttcgtt
cacgcgcaccaccgccagccgaccgtcgacgaactggcgaagctgacgggagtgtcggtc
gacaaagcccaccgcactcgcgaagcgatgcgcgagacggtttcgatcgacgactccaac
gcgatgcaacgacaatcgatcgccgaacttttgcatgattcatcgcaggcgagcgatccg
acggcggggctggagcgagaggagatcgaccggacggtgcagatggttctcgacgcgctg
ttgccacgcgaacgacgcgtcgtcgaactgcgttacgggatggacgacggaagccccaag
acactgctgcaagtcagccaagcgatgtcgctgtcgcgggaacggatccggcagatccaa
agcactgcgatcgccaagatgcgcgacgtcgccgaacagatcgacgactaa
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