Rosistilla oblonga: CA51_07010
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Entry
CA51_07010 CDS
T06941
Symbol
ppiB_1
Name
(GenBank) putative peptidyl-prolyl cis-trans isomerase
KO
K20276
large repetitive protein
Organism
rol
Rosistilla oblonga
Pathway
rol02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rol00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CA51_07010 (ppiB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Pro_isomerase
Cadherin_4
He_PIG
Big_13
Thioredoxin_2
Ig_SIBA-E_2nd
Thioredoxin
Motif
Other DBs
NCBI-ProteinID:
QDV10847
LinkDB
All DBs
Position
963138..967748
Genome browser
AA seq
1536 aa
AA seq
DB search
MRNNGSRFLRLEPLEHRQLLAGDVDLLPPIAPASDETVQYAMMSTTAAEGEVTPEGEAAP
DLVAFAKALSDGGVVFFGAAWCPNCTEQKELFEDGQNYLPFVEVTNPDHSLNATGTAEGI
SSFPTWRFQDGTEVEGVLSLADISQRSGIAIPQGETPSFVPVGNQSVGIGSPLHVPIDAY
DPDEQPLTVTVSSSDPNLLEASVVSGNRSWRLKIADYGEMVFELYEQRAERPTSRIIELT
EDGFYDGITFHRILDDFVLQAGDPLGLGSGGSDLPDFDDQFHEDLQHNATGILSYAKTTD
DTNDSQFFITEGDSRHLDFNHSIFGQLVEGEAVREAISEVPTDSSGRLTTAFANAFGQIT
IEEASIFTDNENSVVMLKPTGNGTGPVSVTITVTDSDGNQTSEVITVNVTADNQLNSNGK
PFLGDLSDVATTAVQPATIQLSSSDVEGDAVTYAAFNVGTVGYTTSVNQSTGEVTVTPPA
GFVGTFDVMVGVKAASSTVTTADSTSFDLQTLSVTVQASALQGVSLDAASDTGVSNSDGI
TSSTNPTFTITGTTAGSTVELLSGTTVIGSAVATGTTTQITTTELAANGNGTYSISARQT
SGGTTSAATTPITVVYDSSAPAALSTQIASQAIAGSLYTLDLGHVEEGNGLVYSLANGPA
GMTINAQTGVVSWTPTTAQVGDQSFTVTTSDRAGNSRDNQFNLNVGEEATVTLDMSFTDL
DGNAITQLKPGDEFLLNITAIDERLFESLKGVATAYLDILYDQNLAEPVGNNLVIDVDDT
DDEIADSPFTFTNSFRDSRRGSAATPGLIDELGAFSTSPPGLQAGLVSIHFRALSAGTLV
FTGDPADGNGTEVLVHGSDDELDPSKVNFGNASINIVSTFSAADDIFNFDEDSSNNAMDV
LSNDQLLVSGTTLTIVSTSTPVNGGTVSIVGNGQSLSYTPGANINGADEFTYTVEDQNGS
SQTVTVSVGLQPVNDPPNAVADTFSDINRGSTGNVLEVLDNDTISPDENETLRIISVGTT
SHGGTVTIASGGSYIQYTPAANFSGTETFNYTISDRTTGGLTSTATVTVNVSALSTGTHT
FTVLEDAAATSFDVLTGDRAANPDEASISLQSIVSTSHGGTALITSDGQVQYKPAANFFG
TETVVYTILSGDGDTGTGTITFNVDGVNDPPVAVDDSFSVGKSGGAKTLSVLDNDTIGVD
TNETLTIESINTANLTGTVTISSDKLSLVYTPNGTFTGNETFTYQIADGNGGQATATVTV
NVLDYVPRDFNFTIDSTFLNTFGFDVILSGTDEFGNAVNATVTVDAAGTFTFADQAPGSY
TLTVPAIPFLIGAEQDQVFAIESDMDDGDYTAPAIEIGAMHPSYIALRDWFGSTSRENVV
LAVVQEGDTPGINLQVSNLASGLTDPKVVLSDDGSQVIVTATVSNGLASSALDVDSDDVD
MRGQEGDFMLLRINAPAATEFTPVSSSSSASGTAAAVFAEGEASSSAMVLPLGSADVWGD
QQADSQFAGDVPGEDDDEDDETVASDIVFAQLGDLS
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaacaacggttcgcggtttctgcggctggaacctttggagcatcgtcagttgttg
gcgggtgacgtcgatctgctgccaccgatcgctccagccagcgacgaaacggttcagtat
gcgatgatgtcgacgaccgctgccgagggggaagtaactcccgaaggcgaagcggcgccc
gatcttgtcgcctttgccaaagccctctccgatggcggagtcgtcttcttcggagcggct
tggtgcccgaactgcaccgagcagaaagagttgttcgaggacgggcagaactatcttccg
tttgtcgaagtcaccaatcccgatcacagcctcaatgcgaccggcaccgccgaagggatc
tccagtttcccaacttggcgattccaggacggaaccgaggtcgaaggggttctgtcgctg
gccgatatctcgcaacgcagtggcatcgcgatccctcagggagaaactcccagctttgtt
cccgtcggcaaccagagcgttggcatcggttctccgctgcatgtcccaatcgacgcttac
gatcccgatgaacaaccgttgacggtaactgtcagcagttcggatccgaatctgttggag
gcgtcggtggtcagcggcaatcgcagctggcggctgaagatcgccgattatggcgagatg
gtcttcgagttgtacgaacagcgggccgagcggccgacgtcgcggatcatcgaattgacc
gaggacggattttacgacgggatcacgttccatcgcatcttggacgattttgtcctgcag
gctggcgatcccttaggtctgggctctggcggttcggacctgcccgacttcgacgatcaa
ttccacgaggatctgcagcacaacgcgacgggcatcctgtcgtacgccaagaccaccgac
gacaccaacgattcgcagttcttcatcaccgaaggggactcacgccacctcgatttcaat
cactcgatcttcggtcaattggtcgaaggagaagcggttcgcgaagcgatcagcgaggtg
ccgaccgacagcagcggccggctgaccaccgcgttcgcaaacgcttttggacagatcacg
atcgaagaagcgtcgatcttcaccgacaacgaaaactcggttgtcatgctgaagccgacc
ggcaacgggaccggcccggtgagcgttacgatcacggtcaccgacagcgacgggaaccaa
acgtcggaagtgatcacggtgaacgtgaccgccgacaatcaactgaactccaacggcaag
ccgttcctgggtgatctgagcgacgttgccacgaccgctgtacagcccgccacgatccaa
ttgtccagcagcgatgtcgaaggggacgcggtcacctacgctgcgtttaacgtcggcacc
gtcggctacactacgtcggtcaaccaatcgacaggggaagtcaccgtgacgccgcccgcc
ggttttgtcggtacgttcgacgtgatggttggtgtcaaagcggccagcagcaccgtgacc
actgccgattcgacatccttcgatctgcagaccctcagcgtgacggtgcaagcgtcggcg
ttacagggtgttagtctcgatgcggcaagcgataccggcgtcagcaatagcgacggaatc
accagcagcaccaatccgacgttcacgatcaccggaaccacagccggttcgaccgtcgaa
ctgttgtcgggcaccacggtgatcggatcggctgtcgccaccggcacgacgactcagatc
acgacgactgaattggcggccaacggcaacggcacctattcgatctcggcgcggcagacc
agcggcgggacgaccagcgcggcgaccactccgatcaccgtcgtctacgactcgtcggct
cccgcggcactcagcacgcagatcgcctcacaagcgatcgccggatcgctttataccttg
gatcttggacacgttgaagaaggcaacggactcgtctactcgctggccaacgggcctgcg
gggatgacgatcaacgcgcagaccggcgtcgtttcctggactcccacaaccgctcaggtt
ggcgatcagtcgtttacggtaacgacttcggatcgagcgggaaacagtcgcgacaaccag
ttcaatctgaacgtcggcgaagaagcgacggtgacgttggacatgtccttcaccgatctc
gatggcaacgcgatcacccagttgaagccgggggacgagttcctgctgaacatcaccgcg
atcgacgaacggttgttcgaatcgctcaaaggtgtcgcgacagcctacttggacattctg
tacgaccaaaatttggcggaaccggttgggaacaatctagtaatcgatgtcgacgacacc
gacgatgagatcgccgattcgccctttacgttcaccaacagcttccgcgactcgcgacgc
ggttcggcggcgacgcctggtttgatcgatgaattgggagcgttctcgacaagtcctccc
ggcctgcaagctggcttggtctcgatccatttccgcgccttgagtgcgggaacgcttgtc
ttcaccggcgatccggctgacggaaacggaaccgaggttctggtccacggcagcgacgac
gaactcgatccatcgaaggtcaacttcggcaacgcgtcgatcaacatcgtctctaccttc
agcgccgccgacgacatcttcaacttcgatgaagatagttccaacaacgcgatggacgtt
ctgagcaacgaccagttgttggtttccggaacgacattgacgatcgtcagcaccagcact
ccggtcaacggcggtacggtttcgatcgtcgggaatggacaatcgctgtcgtacactccc
ggggccaatatcaacggagccgacgagttcacctatacggtcgaagatcagaacggatcc
agccaaaccgtgacggtttcggtcggcttgcaacctgtcaacgatccgccaaacgctgtc
gccgatactttcagcgacatcaaccggggcagtaccggcaatgtgctggaagttttggac
aacgatacgatctcgcccgacgagaacgaaacgctgcgaatcatttcggttggcacaacc
agccacggcggaacggttacgatcgcctcgggcggtagctacattcagtacacgcccgcc
gctaatttctctggcaccgaaaccttcaactacacgatcagcgatcggacgaccggcggg
ctgaccagcaccgccacggtgactgtcaacgtctctgcattgagcaccgggacgcatacc
tttaccgtcctcgaagatgctgctgcgacgtcgtttgatgttttgacaggcgatcgggca
gcgaatcccgatgaggcgagcatctcgttgcaatcgatcgtttcgacttcgcacggcgga
acggcgttgatcaccagcgatggccaggttcagtacaaacccgccgccaacttcttcggc
accgagaccgtcgtctacacgatcctcagtggcgatggcgatacggggaccggaacgatc
acctttaatgtcgatggcgtcaacgatcctcccgtagcggtcgacgattcgtttagcgtt
gggaaatcgggtggcgctaagacgctgtcggtgctcgacaacgatacgatcggcgtcgat
accaacgaaacgctgaccatcgaatcgatcaacaccgcgaatctgaccggcacggtgacg
atcagcagcgataagctgtcgctggtctacacacccaacggaacgttcactggaaacgag
acgttcacctatcagatcgccgacggcaatggcggccaagcgacagcgacagtaacagtg
aacgtgctcgattacgtgccacgcgacttcaactttacgatcgatagcacattcttgaac
acgtttgggttcgatgtgatcctgagcggcaccgacgaattcggcaacgctgtcaacgca
accgtgacggtcgatgccgccggcacgttcacctttgccgatcaagcaccgggcagctac
acgttgacggttccggcgattccgttcttgatcggtgccgaacaagaccaagtcttcgcg
atcgaatcggacatggacgatggcgattacaccgcaccggcgatcgagatcggcgcgatg
catccgtcttatatcgcgctccgcgattggttcggcagcacatcgcgggagaacgtcgta
ttggcggttgtccaagagggtgatactcccggcattaacctgcaggtctccaacttggct
tcgggcctgaccgatccgaaggttgtgttgagcgacgacgggtctcaggtgatcgtcacg
gctaccgtctccaacggtctggcctcctcggcgctcgacgtcgattcggacgatgtcgat
atgcgtggccaagagggcgatttcatgctgcttcggatcaacgcgccagcggctactgaa
ttcacgcccgttagcagttcgtcgtcggctagcggaaccgccgcggcggtctttgccgag
ggagaggcgtcgagttcggcgatggtcctgccgttgggttcagccgatgtttggggcgat
cagcaggccgattctcagtttgccggcgacgtgcccggagaagacgacgacgaggatgac
gagaccgtcgccagcgacatcgtgtttgcccagttgggtgatttgagctag
DBGET
integrated database retrieval system