Rosistilla oblonga: CA51_12170
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Entry
CA51_12170 CDS
T06941
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rol
Rosistilla oblonga
Pathway
rol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CA51_12170 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rol03019
]
CA51_12170 (recQ_2)
03400 DNA repair and recombination proteins [BR:
rol03400
]
CA51_12170 (recQ_2)
Enzymes [BR:
rol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CA51_12170 (recQ_2)
Messenger RNA biogenesis [BR:
rol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CA51_12170 (recQ_2)
DNA repair and recombination proteins [BR:
rol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CA51_12170 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
HTH_40
ResIII
SKI
Motif
Other DBs
NCBI-ProteinID:
QDV11355
LinkDB
All DBs
Position
complement(1643642..1646581)
Genome browser
AA seq
979 aa
AA seq
DB search
MPSTLSPSDFLDRFGLTQFRSGQEAVIQQVLDGKDVLCVMPTGGGKSLCYQLPSVMLDGL
TIVVSPLIALMQDQVDVLQKKGFRATLINSSLKPAEQFDRMQAMAEGKYDLIYIAPERLR
NSRFLESVRKTKVSLLAVDEAHCISEWGHDFRPDYARLGQFRIRNLGGVQTIALTATATP
TVRDDIVKLLSLHEPKPFITGFARENLRFAVSPCGSDREKDQRLAEFLRGQKGIGIIYAA
TRKRCEEIALWLPGKLGKPVGIYHGGLDPQQRRSVQEDFMAGKLAAIVATNAFGMGIDKS
DIRYVVHYNMPGSLEAYYQEAGRAGRDGLPSECLLLFSYSDRYIQEFFIENNYPTRDVVA
AVYKFLHSRTDDPIEMTLDQIREKIGLQVGGEAIGTAERLLAKTGVLERLDSSANQAIIR
IDSTLPTLVDMLPREAKVRRRVLQAAEKIIGDRREEDVYFSLDRIVKSTDQSRESVTRTL
RELSRLRDFDYVPPFRGRAIHFRKRDVPFNDLKIDFVELERRKRAEYEKLDHVIRFAQTP
NCRQLAVLNYFGDPAADVCGNCDRCDLTQPRKNAAVTTAAAVPLTAEETEEQQLITQLVR
IVLSALARTHGRFGKGLVAQMLAGSQNKKLQQLKLDRLSTFGLLKGLKQAQVTDLLDAVC
SVGMAQQIEVTQRRPTVKLTDFGQEVMKGNQPVPVAFTIARPLKIKAMALVRKMAAAEDV
TETPMEKPKSTANPDLLKTLRKWRLEAANELGVPAYRIVSNATLEAIAAKQPQSVSELES
IRGIVPETVEQYGYALVQLIESQIADDSDEPLEEDEDEIEPQPPSVREQLEPSEEPRSSG
NGKPIAADPIASPQPPATDTPATASPNTTAPQPVTDNASGDPTSVGDTFWTWKLLRDGYT
AEQCCAIRQIDRETLLSHLIDAVRDQRPVQLDWVAGEDSKLLATIAAATDSAATLDGLIP
SHWDPKLLQLAREAHRSQG
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgacactttccccaagcgatttcctggaccggtttggcctgacccaattccgc
agcgggcaggaagcggtgattcaacaggtcctcgacggcaaggacgtgttgtgcgtgatg
ccaaccggcggcggcaaaagcctgtgctatcaattgcccagcgtaatgctcgacgggctg
acgatcgtcgtctcgcccctgatcgcgctgatgcaggatcaggtcgacgtgctgcaaaag
aaaggctttcgggcgacgctgatcaacagctcgctgaaaccggccgaacagttcgatcgc
atgcaggcgatggccgagggaaagtacgacctgatctacatcgcgccggagcggctgcgg
aacagccgctttttggagagcgttcgcaaaacgaaggtctcgctgctggcggttgatgaa
gcccactgcatcagcgaatggggacatgatttccgccccgattacgctcgcctggggcag
ttccgaattcgcaatctgggcggcgtgcagacgatcgctctgacagccaccgccacgccg
acggttcgcgacgacatcgtcaagctgttgtcgctgcacgaaccgaagccgttcatcacc
ggtttcgctcgcgaaaacctgcggttcgccgtatctccctgcggcagcgatcgcgagaag
gatcaacggctggcggagttcctgcggggccagaaggggatcgggatcatctatgccgcg
acgcggaaacgctgcgaagaaattgccctctggttgccggggaagcttggcaaaccggtc
gggatctaccacggcggcctcgatccgcaacagcggcggagcgtccaagaggacttcatg
gcggggaagttggccgcgatcgtggcgaccaacgcgtttgggatgggaatcgacaaatcg
gacatccgctacgtcgtccactacaacatgcccggcagcttggaagcctattaccaagaa
gcgggccgggccggccgagacggtttgcccagcgaatgtctgctgttgttcagttacagc
gaccgctacatccaagaatttttcatcgagaacaactacccgacccgcgacgtcgtcgcg
gcggtctacaagttcttgcactcccgcaccgacgacccgatcgaaatgacgctcgatcag
attcgcgagaagatcggcctacaagtcggcggcgaggcgatcgggaccgccgagcggttg
ctggccaaaacgggagtcctggagcggttggacagcagcgccaaccaggcgatcatccgg
atcgacagcacgctgccgaccttggtcgacatgctgccgcgggaagccaaagttcgccgc
cgcgtgttgcaagcggctgaaaagatcatcggcgatcgacgcgaagaggacgtctatttc
tcgctcgaccggattgtcaaatcgaccgatcaatcgcgcgaatcggtgacgcgaacgctg
cgggaattgagtcggttgcgcgacttcgattacgtgccgccgtttcgcggccgggcgatc
cacttccgcaaacgcgatgtccccttcaacgacctaaagatcgatttcgtcgaactcgaa
cgccgcaagcgggccgaatacgagaagctggatcatgtgatccggtttgcgcaaacgccg
aactgccggcagttggcggtgctgaattatttcggcgatccagcagccgacgtctgcgga
aactgcgaccgatgcgacctgacgcagccccgaaaaaatgcggcggtgacaacggccgcc
gccgttccgttgaccgctgaagagaccgaggaacagcagctgatcacccagctggtgcgg
atcgtgctcagcgccctggctcgcacccacgggcgatttggcaaagggctggtcgctcaa
atgttggccggttcgcaaaacaagaagctgcaacaattgaagctcgatcgcttgagcacc
tttggtttgctgaagggactcaaacaagctcaagtcaccgatctgctggacgccgtctgc
agcgtcgggatggcgcaacagatcgaagtcacccagcggcggccaacggtcaagctgacc
gatttcggacaggaagtgatgaagggaaaccaaccggttcccgtcgcctttacgatcgcc
cggccgctgaaaatcaaagcgatggcgttggtccgcaagatggccgctgcggaagacgtc
accgagacgccgatggaaaaaccgaaatcgacagcgaatcccgatcttttgaagacgctc
cgcaaatggcgactggaagcggccaacgaactgggcgttcccgcctaccggatcgtcagc
aacgcgaccctcgaagcgatcgccgccaaacagccgcagagcgttagcgaactggaatcg
attcgcggcatcgttcccgaaacggtcgaacagtatggatacgcgctggttcagttgatc
gaatcgcaaatcgccgacgattcggacgaaccgctggaagaggacgaagacgaaattgaa
cctcagccgccatcggtccgcgagcagctggagccgagcgaagaaccgcgatcaagcggg
aacgggaaacctatcgccgccgatccgatcgcatctccgcagccgccagcgaccgacaca
ccggcgacagcatcccccaacaccacagcacctcaaccagtaaccgacaacgcgtcgggc
gacccgacaagtgtcggcgacaccttctggacctggaaactgctgcgggacggatacacc
gcagagcagtgttgtgcgattcgccagattgaccgagagacacttttgtcgcacctaatc
gatgcagttcgcgaccaacgcccggtccagctcgactgggtcgccggcgaggactcgaaa
ttgctcgccacaatcgctgcagcgaccgattcggcggcaactctcgacggcttgatcccc
agccactgggatcccaagctattgcaattggctcgcgaagctcatcggtcccaaggctga
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