Rosistilla oblonga: CA51_19820
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Entry
CA51_19820 CDS
T06941
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
rol
Rosistilla oblonga
Pathway
rol02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rol00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CA51_19820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Dockerin_1
GEVED
SdrD_B
Cadherin_4
Reprolysin_2
Reprolysin_5
Reprolysin_3
Peptidase_M10
Reprolysin_4
DUF4953
MetallophosN
Peptidase_M43
Motif
Other DBs
NCBI-ProteinID:
QDV12106
LinkDB
All DBs
Position
2727763..2732694
Genome browser
AA seq
1643 aa
AA seq
DB search
MRRRSDKNRKQLRRRLIQCESLEDRRLLAPVIVSELEPNNFVRDAQVLNLGTAPGKTPEV
TVSATFDSGSPDYYKFDLTAGDVFSSRITVGGTNTSFNDLDISLGKVNASGTSSTEVRGN
NSIGDLSLAGQPLVPASSPVLTGGDVYFNYVITETGTYSFRVGTGNSGANPNITPIGSYQ
MEFQTLRSPLEAEPIGTHQVLFLDFDGGFVDLNDLDDTQFGSVRLPSLAESLFDLGFEVT
NEDRLIDVIIAEMEENYGDVATFGANGDYDATGIPGQYKLEILNSRDHEDPWGLPNVSRL
MMTGAGADINIAGAFGIASSLDVGNFDTEETAFIFAEEFFGLTNVGDVFAVPHSISVSTV
DMLGKAIGLVAAHESGHFFGLRHTNNGNASDQIMDTGGNLPGLLGVGPDGIFGTVDDVDT
DFGTDSYTAGELDTFGVQDSINALAYSLGTGTAGGSISGFVFRDSNGDGRSTSDLGLAGV
TVFGDLDSDGVLDSGEPRSVTDANGNYALSAAAGTFNIIAQVPSGYAATTPTSVSTTTGS
GALTGPSFGFKKVDFDVTGVKWNDINGNGVRDAGEPGIGGVYIYVDIDGDDRLDLFEPQA
ITAADGTYSLDFPGADTYTVREVVQPGFRQVFPASGEHIVVFDGTQIVPNQNLNFGNQAA
RDFGDLPARYGTLLSADGASHGFSSTLGLGALTDIEADGVPSTGADGDDNNGSDDEDGIV
PVSAMAPGATVDFAVTARNAGQTAYLQGWIDFNNDGVFSSSEQVFKNQTLINGTQVLTTD
IAVPAGTTEGAKYARFRYGPELNLGTTGFSTAGEVEDYVFTVQTTTALAQPDRYDDLTHP
AVQDFTVTRNSLNADLRVLANDSMFDSSIRVARVDPLVGTTGTLNIGTGGQSVVYTPRSG
FTGEDTFEYTVVTDSGLSSTTTVTVNVVPLNDAPVAVDDLFRVPGNLSTSTSLSVLSNDS
ASNQGGLQIVSVGTTDFGGTVNFNSQSISYLPAPGFTGTEQFTYTVRDSSGFSDTATVTV
QINPNSLANEVEYSVRTLDLSGNAVTAINVGDEFQVQVLVDDIRAGASVLEQGLAAAYVD
LLYSKLVTTVAPTDPGNTSSFDITYGPLFNQLNTGDALDPNVINEVGGSQASIGNQQVHS
GPAVLFTLTMRAIGPGTALFQTDPADAIRSDVVFLNDPSEEVPTNRQLFGGTSLNIIPAG
LPIPTAVDDSYRVVQGVIESPMLVLGNDIQGGAGASSIAEIGTPAHGSARVSGNTILYTP
QAAFTGVDQFTYTILSPDGFRSTATVTVFVGTDAQVDANDLVDLPFQVFDASGNAILDAA
GNQLRTVRVGDVLTLQVNVDDLRTGAFLNTGVFSAYQDILYSASNLSVVPRSATQTSTLD
FSVEFGQFYTNVQRGTAGTVGIINEVGATQTTNSDGSGAPLGSQVRDLMAIEFVATATGT
ATFIGDPADVSPDQDTLLFEAASKVVPIDQIRYDRKSITISPATTASGESEFQNPVNRYD
VNDDGNVTPIDALSIINQLNSSGSGQLAAEGESASEIRRFVDVNGDQFVTPIDALLVINA
LNTQSVSGASGEAPVAANNAASEPETQGSDDFFASLGEEKTSQFGSAATQTGSASQWFDA
SDNDDEEDSIDTIVDDITQQWGL
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgtcgttcggataaaaatcgcaagcaactgcgtcggcggctgattcaatgtgag
tcgcttgaagatcgtcggttgctagctcccgtgatcgtttccgaactggagccgaacaat
tttgttcgcgacgcgcaggttctgaacctggggacggcaccgggcaaaacgcccgaggtg
acagtttcggcgaccttcgattctggatcgccggactactataaattcgacctgaccgcg
ggcgatgtgttcagcagtcgaatcaccgtcggcggcaccaacacgtcgttcaacgatctg
gacatcagcttaggcaaggttaacgcgtcggggacgtcgtcgaccgaagtccgcggcaat
aactcgatcggcgacctgagtctcgcggggcaaccgcttgttcccgcttcgtctcccgta
ctgaccggcggcgatgtctacttcaattacgtgattaccgagaccggaacgtacagcttc
cgcgtcggcacgggcaactcgggggccaacccgaacatcacgcctatcggttcctaccag
atggagttccaaacgctccgttcgcctttggaagcggaaccgatcggaacccatcaggtt
ctgttccttgatttcgatggtggatttgtcgatctcaacgatctcgacgacacccaattt
ggttcggttcgcttgccttcgctggccgaatcgctgtttgatctcggcttcgaagtcacc
aacgaagatcgtttgatcgacgtgatcatcgccgagatggaagagaactatggcgatgtc
gcgacgtttggtgccaacggcgattacgatgcgactggcatccccggccaatacaagctg
gaaattctaaacagccgcgaccacgaagatccttggggcctgcccaacgtcagccgcttg
atgatgacgggtgctggagccgacatcaatatcgcgggtgcctttggtatcgcgtcgagc
ttggacgtcggaaactttgacaccgaagagacggcgttcatctttgccgaagagttcttt
ggtctgaccaacgtcggcgacgtctttgccgttccgcattcgatcagcgtttcgaccgtc
gatatgcttggcaaagcgatcggacttgtcgcggctcacgaatcggggcacttcttcggt
cttcgccacaccaacaatggaaacgccagcgatcagatcatggataccgggggcaatctt
cccggtttgctaggcgttggtcccgacggaatctttggcaccgtcgacgatgtcgacacc
gattttggtaccgattcttatacagccggtgaactcgacacgtttggcgtgcaggattcg
atcaacgcattggcctacagtctggggactggaaccgccggcggatcgatcagcggattt
gtcttccgcgactccaacggcgatggccgcagcacatccgatctcggattggctggcgtg
actgtcttcggcgatctcgacagcgatggcgtcctcgattcgggtgaaccgcgatcggtc
accgacgccaacggaaattacgcactctccgccgcggcgggaacgttcaacatcatcgct
caggttccaagtggttacgccgctacaacaccgacctcggtgtcgacgacaaccggcagc
ggagctctcaccgggccaagcttcggatttaagaaggttgacttcgacgtcaccggcgtg
aagtggaacgacatcaacggcaatggtgttcgcgatgccggcgaacctggcatcgggggc
gtttacatctacgtcgacatcgatggcgatgatcgattggatctgtttgaaccccaagcg
atcacagcggccgacggtacctacagcctcgatttccccggagcggatacctacaccgtt
cgcgaagttgtgcagcctggtttccgccaggtcttcccggcttcgggtgaacacatcgtg
gtgttcgacggcacgcaaatcgttcctaaccagaacttgaacttcggtaaccaagccgct
cgcgactttggcgatctgcccgcacggtacggaactctcttgagtgccgacggtgcaagc
cacggcttcagcagcacgctggggctgggagcgttgaccgacatcgaagccgacggcgtt
ccatcgaccggcgccgatggcgacgacaacaatggcagcgatgacgaagacggcatcgtc
cctgtctcggctatggctcctggagcgactgtcgattttgctgtgacggcccgcaacgct
gggcaaacggcttatctgcaaggctggatcgatttcaataacgacggtgtcttcagttcc
agcgaacaggtgttcaaaaaccaaacgctgatcaacggaacgcaggtcctgaccacggac
atcgcggttcccgcgggaacgactgaaggagcgaaatatgctcgcttccgttatggaccc
gaattgaacctggggacgaccggattctcgaccgcgggtgaagtcgaagattatgtcttc
accgtgcaaacgacaaccgctctggctcaacccgatcgctacgacgatctgacgcatcca
gcggtgcaggacttcaccgtcacccgcaactcgctcaatgcagatcttcgcgtgttggcg
aacgattcgatgttcgacagttcgattcgcgtggcccgtgtcgatccgcttgttgggaca
accggcacgctgaacatcggcaccggcggccaatcggtcgtctacactccacgcagcggt
ttcaccggcgaagacactttcgaatacaccgtcgtcaccgactcggggctatcctcgacc
acaacagtcacggttaatgtcgttcctttgaacgatgctccggttgccgtcgacgatctg
ttccgagttcctgggaacttgagcacgtcgacctcgctatcggttctgtcgaacgattcg
gcgagcaaccaaggcggcttgcagatcgtgagcgtcggaaccaccgattttggcggcacc
gtcaacttcaactcgcaatcgatctcctacctgccggctcctggattcacgggcaccgaa
cagttcacctacaccgttcgcgacagttcgggcttctcggacaccgcgaccgtaacggtc
cagatcaatccaaattcgcttgccaacgaagttgaatattcggttcgcacgctcgatctc
agcggcaacgcggtcactgcgatcaacgttggcgacgagttccaagttcaggtgcttgtc
gacgacatccgcgccggtgcttcggtcctggaacagggactggccgctgcttatgtcgat
ctgttgtacagcaaactggtcaccaccgttgctccaaccgatcctggcaacacctcatcg
tttgacatcacctacggcccgttgttcaaccaattgaacaccggcgacgcgttggatccc
aacgtgatcaacgaagtcggtggatcgcaggcatcgatcggaaaccaacaggtccactcc
ggtcccgccgtcttgttcacactgacgatgcgagcgatcggcccgggaaccgctctcttc
cagaccgaccccgccgatgccatccgcagcgacgttgtcttcttgaacgatccatcggaa
gaggttccgacgaatcggcagttgtttggcggtacgtcgttgaacatcatccctgccggc
ttgccgatcccaacggctgtcgatgattcctaccgcgtcgttcaaggcgtgatcgaatcg
ccgatgcttgttttgggtaacgacatccaaggtggtgccggtgcttcgtcgatcgccgaa
atcggaactcccgcacacggttcggctcgcgtttccggaaatacgatcctgtatactccg
caagctgccttcaccggtgtcgatcaattcacctacacgattctgtcgcccgatggattc
cgtagcaccgccacggtaactgtctttgttggaaccgacgctcaggtcgacgccaacgat
ctggtcgatttgccattccaggtttttgacgcttcgggaaatgcaattctcgatgccgca
ggcaatcaattgcgaaccgttcgcgttggcgacgtcttgaccttgcaggttaatgtcgac
gatcttcgcaccggggcgttcttgaacaccggcgtcttctcggcctatcaggacatcctg
tacagtgccagcaacctgtcggtggtaccacgctcggcgacgcaaaccagcacgctggac
ttcagcgtcgaattcggccagttctacaccaacgtgcaacgcggcaccgcgggtaccgtt
ggtattatcaacgaagtcggagctacacagaccaccaacagcgatggctcgggagctccc
ttgggcagccaagtacgagacttgatggcgatcgaatttgtcgccaccgcaaccggtacc
gctaccttcatcggcgacccagcggatgtctcgcccgaccaagacactttgttgttcgaa
gctgcgtcgaaggttgtgccgatcgatcagatccgttacgaccgcaaatcgatcacgatt
tcgcccgcgacgactgcatcgggcgaatcggagttccagaatccagtcaatcgctacgac
gtcaacgacgatggcaacgtgacgccaatcgatgcgttgagcatcatcaaccaactgaac
tcgagtggttcgggacagctggccgccgaaggtgaatcggcctccgagatccgccggttt
gtcgacgtcaacggtgatcaatttgtgaccccaatcgacgcgttgttggtgatcaatgcc
ctgaacacgcaaagtgtttcgggtgccagcggtgaagctcccgttgcggcaaacaacgct
gcttcggagcccgaaacgcaaggcagcgacgatttcttcgccagcttgggcgaagagaag
acatcgcaatttggttcggccgcaacgcaaaccggttcggcatcgcagtggttcgacgcg
tcggacaacgatgacgaagaggattcgatcgatacgatcgtcgacgatatcactcaacaa
tgggggctctaa
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