Rosistilla oblonga: CA51_21570
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Entry
CA51_21570 CDS
T06941
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
rol
Rosistilla oblonga
Pathway
rol02020
Two-component system
rol02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rol00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CA51_21570 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CA51_21570 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rol03021
]
CA51_21570 (rpoN)
Transcription machinery [BR:
rol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CA51_21570 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_23
LacI
HTH_Crp_2
LEM
HTH_21
MarR
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
QDV12275
LinkDB
All DBs
Position
2940687..2942171
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AA seq
494 aa
AA seq
DB search
MGFEQRQQQVQKLAPRMIQSMEILQLPLLALQERVEQEMNENPLLEIQDDDPQMPDDPEE
SYENPDAPSESERELVVDNDHDNQDDFERLLNMKNELPNTFDEPFRKSSNQMQEDGDRRH
DLMANAEAHPESLNDFLLHQLAELDIDTDVELMAERIISTLDARDGGYLRTPLSDLLPSN
HSPEDLELAKRALAVVQSLEPTGIAARDLSECLLLQLAPDVPYYEEMKTLITGHLEDIAG
NRLPAIQRKTGYSLDKIQKVKDELHSLNPKPGAAFMETYVPTVTPDVIVEQDEDGQYKVR
LDDDRVPTLFISEYYRQRLQDPSATTEEREYIKQKINGAQWLIDSIEQRRSTLTKVSQAI
VDHQKAFLDLGPEAIEPLKMQQIADRVGVHVTTVSRAVDDKWIQTARGILPLKRFFVGGT
QTEDGDDVAWDTIRIKLQEVIDNEDKSKPLSDEDIVKELKKHGMTVARRTVTKYRKKMGI
PSSRQRRDWMLENK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgaacagcgtcaacaacaagttcaaaagctggccccgcggatgatccagtcg
atggagatcttgcagttgccgttgcttgcgctgcaggaacgtgtcgagcaggagatgaac
gaaaacccgttgctggagatccaggacgacgatccccagatgcccgacgatcccgaggaa
tcgtacgagaatcccgatgcgccaagcgaatcggaacgggagcttgtcgtcgacaacgat
cacgacaatcaggacgatttcgagcgcttgttgaacatgaaaaacgagctgcccaatacg
ttcgacgaaccgtttcgcaagtcgtccaaccagatgcaggaagatggcgatcggcggcac
gatctgatggccaatgcggaagcccaccccgaatcgctcaacgattttctgctccaccaa
ctcgccgaactcgatatcgataccgatgtcgaattgatggccgaacgcattatcagcacc
ctggatgcccgcgacggcggttatctgcggacgccgctaagcgatctattgccatcgaac
cattcgcccgaagatctcgaactggcgaagcgtgcgttggcggtggtccagtcgctcgaa
ccgaccggcatcgcggctcgcgatctctccgaatgcctgctgctgcaactcgctcccgac
gtgccgtattacgaagagatgaagacgctgatcaccgggcacttggaggatatcgccggc
aaccgcttgcccgcgatccaacgcaaaaccggctattcgctcgacaagatccaaaaggtc
aaagacgaactccattcgcttaaccccaagcccggggcggcgtttatggaaacctacgtc
cccaccgtcacgcccgatgtgatcgtcgaacaggacgaggatgggcagtacaaggtgcgg
ctggacgatgaccgcgttccgacccttttcatcagcgaatattatcgccagcggttgcag
gatccgtcggcgaccaccgaggagcgggagtacatcaaacagaagatcaacggtgcgcag
tggttgatcgattcgatcgaacaacgacgcagcacgttgacgaaagtttctcaggcgatc
gtcgatcaccagaaagcgttcctcgatctcggtcccgaagcgatcgaaccgctgaagatg
caacagatcgccgatcgcgtcggcgtgcacgtgacgacggtcagccgggctgtcgacgat
aaatggatccagaccgcgcgtggcatcctgccgctgaagcggttcttcgtcggcggcacg
caaaccgaagacggcgacgacgtcgcgtgggatacgatccgcatcaagctgcaagaagtg
atcgacaacgaggacaagagcaagccgttgagcgacgaggatatcgtcaaagagctgaag
aagcacggcatgacggtcgctcgccgaacggtcaccaagtaccgcaagaaaatgggaatc
cccagcagccgccaacgtcgcgattggatgctggagaacaagtag
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