Rosistilla oblonga: CA51_29170
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Entry
CA51_29170 CDS
T06941
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rol
Rosistilla oblonga
Pathway
rol03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CA51_29170 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rol03400
]
CA51_29170 (alkA)
Enzymes [BR:
rol01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CA51_29170 (alkA)
DNA repair and recombination proteins [BR:
rol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CA51_29170 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
DUF4317
Motif
Other DBs
NCBI-ProteinID:
QDV13031
LinkDB
All DBs
Position
complement(3981797..3982435)
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AA seq
212 aa
AA seq
DB search
MAKRLQIEAAIAHLRGADPIMAEIIENVGPCSMRQEKDRFRMLVRSIISQQISTGAARSI
RMRLEELVGPDGLTADNLARFSVDQLRTAGISAQKGKYLQDLTTKVVDGELKLQRIGRFS
DAEIIDQLTIVKGIGKWTAQMFLIFSLGRLDVYPHDDLGVRSAIKKRYGLDDLPDHSTGH
AIAAKWRPFASIASWYCWQSLDHDKRVAADGQ
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgtttgcagatcgaagccgcgatagcgcatctgcgtggtgccgatccgatc
atggctgagattatcgaaaacgttgggccgtgttcgatgcggcaggagaaggatcgattt
cggatgcttgtccggtcgatcatctcgcagcaaatctccactggcgcggcccgttcgatt
cggatgcggttggaggaactggtcggccccgatggactgaccgccgacaacctggctcgg
ttttcggtcgaccaactgcggacggcgggaatctcggcgcagaaggggaagtacctgcag
gacctgacaaccaaagtggtcgatggtgagttgaagctacagcgaatcggacgctttagc
gacgcggagatcatcgaccagttgacgatcgtcaaagggatcggaaagtggacggcccag
atgttcctgatcttctcgctgggtagattggatgtctacccacacgatgatctcggcgtg
cgatctgcaatcaagaaacgttacggcttggatgatctgcccgatcactcgaccgggcat
gcgatcgctgcaaagtggcgtccgtttgcgtcgatcgccagttggtactgttggcaatcg
ctagatcatgacaagcgagttgcggccgacggacaatag
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