Rosistilla oblonga: CA51_32340
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Entry
CA51_32340 CDS
T06941
Name
(GenBank) ATP-dependent helicase HepA
Organism
rol
Rosistilla oblonga
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ERCC3_RAD25_C
HDA2-3
Motif
Other DBs
NCBI-ProteinID:
QDV13346
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Position
4425579..4428956
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AA seq
1125 aa
AA seq
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MAYNKRGRTPRGSTSPSATSMLKQILGEASVPFGAPRPRQWPQADPNSTDPLVKRGIERV
RAWYEACLNILDSFPDSITDSDSYESPHAFFVSAVYPDGTVTGQYRKGPERHDVMLAIPD
GSARKRIACSCNVSLGKEYCEHTFHFVDYVYEQLRDTRSWLNRQVAQGLFTAGSFDPKSF
DFGSRARIERILEDLPIAPPDLDLEDAELPPSRSVSQDRIAWNLSTRGTDHEILAIHQQA
KKRGNGWTKGRRVSVSTLNVLEVTLSEADRRVQSLVQIDSSYYRVSTKLDTIAVLRELIG
QPNVLFNMHPAEVVRFDATFQFCRDDKQCWLELVGSKPHNNTFLYNEDCLIHIRNDLASI
RICELHPSQMKTVVAVLKLPRIPVEFEQDLLKRVADLQRVINVKVPESVAGQIIPDTCRP
VVLLRSHTTGSLDFGVRVRDAMDVLHRPGTGLMLKAGKLEGRPVQFQRDADEEIRESDAL
LGKLGQKPGEFDGSISDFEAAIGLVGSLQDLESTGIEVLWDKSSEKPLRVLGSVTTSNVS
VGINRKHDWFQLSGNCDLGEESVPLSELLNALQNPGEESVRGDFVRIGDKGWTKIEKGLR
AKLTGLRDSVTQDRKGLKFDATSASAVRDFLSNDVQVEATRAWHQCLTRLERAEKLEPVL
PAGLNATLRDYQTDGFRWLRRLAEWGVGGILADDMGLGKTLQTLAVILDRSSEGPTLVIA
PTSVGFNWVREAERFAPDLSVHLYRDTDRSEFLSTVGPGSLVVCSYGLALRDADALADVK
WSTLVLDEAQAIKNSRSKTSAAIASIPAQWKVALTGTPVENHLGELWSLFHVISPGVFGG
WDQFRKRFAGPIEKDNDESRRLALRDRLQPFVLRRTKTEVLKDLPPRSDMNLYVELTATE
RMMYDKVRASALGEIDQIANIGDVKDQRFKILALLTRLRQIACSPRMVDESFSQRSSKLQ
LLQETVAELKEEGHRVLIFSQFVKHLTLIREMFDTEGIRYEYLDGQTPADQRQAGVDRFQ
NGDATAFLISLKAGGTGLNLTAADYVIHMDPWWNPAVEDQATDRAHRIGQENPVMVYRLI
SQGTIEEEILKLHDAKRDLVSGVMEGTHAAAKLSTTDLIDLVRGS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggcttataacaaacgcggacgcactcctcgcggttcgacgtcgcccagtgccacctcg
atgctaaaacagattctgggcgaagcgtccgtcccgtttggtgccccgcgtccaaggcaa
tggccgcaggccgatcccaattcgaccgatccgctggtgaagcgaggcatcgagcgcgtt
cgcgcttggtacgaagcctgcctcaatattctcgattcgtttcccgatagcatcaccgat
tcggacagctacgaatcgccacacgccttttttgtctcggcggtctatcccgacggaacc
gtcaccgggcaataccgcaaagggccagagcggcacgatgtgatgctggcgatccccgat
ggcagcgcccgaaaacgaatcgcctgcagctgcaacgtctcgttgggcaaagaatactgc
gaacacaccttccattttgtcgactacgtctacgaacaattgcgagacacccgcagttgg
ttgaaccgacaggttgcccaaggtctgtttacggcggggagcttcgatcccaagagcttt
gatttcggcagccgagcgcggatcgaacgcatactcgaagacctgccgatcgccccgccc
gacttggatctcgaagacgccgaactgccaccatcgcggtcggtgtcgcaggatcgcatc
gcatggaatctctcgacgcgtgggaccgatcacgagatcctggcgatccatcagcaggcg
aagaaacgtggcaacggctggaccaagggacgccgcgtatcggtctcgacgctcaacgtt
ctcgaggtcacgctcagcgaagccgaccgccgcgtccagtcgctggtgcaaatcgattcg
agttattatcgcgtcagcacgaaactggacaccatcgcggtacttcgcgaattgatcggc
cagccgaacgtgttgttcaacatgcaccccgccgaggtcgtccgcttcgacgccaccttc
caattctgccgcgacgacaagcagtgttggttggaattggtcggcagcaagccgcacaac
aacacgttcttgtataacgaggactgcttgatccatatccgcaacgacttggccagcatt
cgcatctgcgaactgcacccgagccagatgaagacggtcgtcgcggtcctcaagctgccg
cggattcccgtcgaattcgaacaggatctgttgaagcgcgttgccgatctgcagcgtgtg
atcaacgtgaaggtccccgaatcggtcgccggccagatcattcccgacacgtgtcgcccc
gtcgtcttgttgcgttcacacaccaccggatcgctcgacttcggcgtccgcgttcgcgac
gcgatggatgtcctgcatcgccccggcaccgggttgatgctgaaagctggaaagctcgag
ggccggcctgtgcaattccaacgcgatgcggacgaagagatccgcgagtcggatgctctg
ctgggcaaattggggcagaaaccgggagagtttgacggcagcatcagcgactttgaagcg
gcgatcgggctggtcggatccctgcaagatctcgaatcgacggggatcgaggtgctgtgg
gacaaatcgtccgaaaagccgctgcgagttctgggatcggtcacgaccagcaacgtcagc
gtcggtatcaaccgcaagcacgattggtttcaactgtcgggcaactgcgatctcggcgag
gaatcggtcccgttgtccgaactgctcaacgccctccagaaccctggagaggagagcgtc
cggggcgactttgtccggatcggtgacaagggctggacgaagatcgaaaagggcttgcga
gctaaattgacgggacttcgcgattcggtcacgcaggatcgcaaggggctgaagttcgac
gccacgtccgcttcggctgtgcgtgatttcttgagcaacgatgtgcaagtcgaagcgacg
cgtgcctggcatcagtgcctgacgcgattggaacgagccgaaaaactcgagcccgtcctg
ccggccggactcaacgcgacgctccgcgactaccagaccgatggctttcgctggctgcga
cggctggccgaatggggcgtcggcgggatcctcgccgacgacatgggattgggcaagacg
ctgcagacgctggcggtgatcttggatcgcagcagcgagggaccgacgctggtgatcgcg
cccacatcggtcgggttcaactgggttcgcgaagccgaacggtttgcgcccgacttgagc
gtccatctttaccgcgataccgaccgcagcgagttcttgtcgacagtgggtcccggcagt
ttagtcgtctgcagctacggtctggcgctgcgagatgcggacgcattagctgacgtgaag
tggtcgacgttggtcctggacgaggctcaagcgatcaagaacagccgcagcaaaacatcg
gctgcgatcgcatcgatccccgcgcagtggaaggtcgcgctgacgggcacgccggtcgaa
aatcatctgggcgaactgtggagtttattccacgtgatctcgccgggcgtctttggcggt
tgggatcaattccgcaaacgcttcgccggaccgatcgaaaaagacaacgacgaatcgcga
cgcctggcgttgcgagaccgcttgcaaccgtttgtgctccgccgcaccaagaccgaggtc
ctcaaagacctgccgccacgttcggacatgaacctgtatgtcgaactgacagcgaccgaa
cggatgatgtacgacaaggtgcgagcgtcggcgctgggcgagatcgaccagatcgctaat
attggcgatgtcaaagaccaacgcttcaagatcctggccctgctgacgcggttgcggcag
atcgcttgcagcccgcggatggtcgatgaatccttctcgcagcgatcgtctaaattgcag
ttgttgcaagagacggtggcggagctgaaagaggaggggcatcgcgtgctgatcttcagc
caattcgtgaagcacctgacgctgatccgcgagatgttcgacaccgagggaattcgatac
gaatacctcgacggtcagactcccgccgaccagcggcaagctggcgtcgatcgcttccaa
aacggcgatgccaccgcatttctgatctctctaaaagctggcggtacggggctgaatctg
accgccgccgactatgtgatccacatggatccctggtggaatccggcggtcgaagaccag
gcgaccgatcgggctcaccggatcggtcaagaaaaccccgtgatggtctaccgattgatc
tcacaggggacgatcgaagaagagattctgaagttgcacgatgcgaagcgcgatctggtt
tcgggagtcatggaaggaactcacgcggcggccaagttgtcgacaaccgacctgatcgat
ctggtccgcgggagctga
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