Rosistilla oblonga: CA51_34700
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Entry
CA51_34700 CDS
T06941
Symbol
rpoA_2
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rol
Rosistilla oblonga
Pathway
rol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CA51_34700 (rpoA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rol03021
]
CA51_34700 (rpoA_2)
03400 DNA repair and recombination proteins [BR:
rol03400
]
CA51_34700 (rpoA_2)
Enzymes [BR:
rol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CA51_34700 (rpoA_2)
Transcription machinery [BR:
rol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CA51_34700 (rpoA_2)
DNA repair and recombination proteins [BR:
rol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CA51_34700 (rpoA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
TPR_2
TPR_14
TPR_16
TPR_1
TPR_12
TPR_19
TPR_17
TPR_11
MIT
TPR_21
ARM_TT21_N
TPR_Slam
ANAPC3
HAT_PRP39_C
TPR_CcmH_CycH
Sarcoglycan_2
SAM_EPH
NatA_aux_su
Motif
Other DBs
NCBI-ProteinID:
QDV13580
LinkDB
All DBs
Position
complement(4749725..4751050)
Genome browser
AA seq
441 aa
AA seq
DB search
MAEAHMLDLKETLLSNASFGPQEIYVIRQAISDDFTHFTELKEGVGLLEQDTDRTPASQT
RLGIGQFLLGRFQDAKQTLQSADGGALAQFYIGRCHFEHCDYAEAMASFEAAKTAGYNAD
ECNLAIAAVHRYMGNAEQALATLDNMFGPVEQSAEYLYQRGATVAVLGGNLPEAVALYER
AIQANPQHAGALFGLAVENDRHGNDDTALELYERASKAFPTGVGVLINLGLMSEDRNDFG
KAQLCYKRILDCYPDHPQARLYMKDASASGNVLYDEETQRRNDRLAQVLNISVSNFELSV
RSRNCLTKMGIDTLGDLTRTSEAELLASKNFGETSLYEIREILSSKGLTLGQFAHEKKTA
DPPVDTSHLSPAEQALLDRPISDLNLSVRARKCMVRLGLNTIGELLRKTADELLECKNFG
VTSLVEIREKLEQHNLTLRGE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctcacatgctcgatctgaaggagacgttgctttccaacgcgtcttttgga
ccacaggaaatctatgtgatccgtcaggctatttccgacgatttcacgcacttcacggag
ctcaaggaaggcgttgggttgttggagcaagacaccgatcggactcccgcgtcgcaaacg
cgattgggcatcggtcagtttttgctggggcgtttccaagacgcaaagcagacgctgcag
tcggctgacggtggtgcgttggcgcagttctacatcggacgctgccacttcgagcactgc
gattacgccgaagcgatggcttcgttcgaagccgccaagaccgctggctacaacgccgac
gaatgcaacctggcgatcgcagcggttcaccgctacatgggcaatgccgagcaagcgttg
gcaacgttggacaacatgtttggtcccgtcgagcaatcggctgaatacctctatcagcgc
ggtgcaaccgtcgcagtgttgggtggcaatctgcccgaagccgttgcgttgtacgagcga
gcgatccaagcgaatccgcagcacgcgggagctctgtttggtctggctgtcgaaaacgat
cgccacggtaacgacgataccgctctggaactttacgaacgcgcttcgaaagccttcccg
accggcgtcggtgttctgatcaacttgggcttgatgagcgaagaccgcaacgatttcggc
aaggctcagctttgctacaagcggattctcgattgctatcccgaccatcctcaggctcgc
ctgtacatgaaggacgcgtcggcatcgggcaacgttttgtacgacgaagagacacagcgt
cgcaacgatcgcctggcccaggtgttgaacatctcggtctcgaacttcgaattgtccgtc
cgcagccgcaactgcttgaccaagatgggcatcgatacgctcggcgatttgactcgcacc
agcgaagcggaactgctggccagtaagaactttggtgaaaccagcctctacgaaatccgt
gagatcttgagcagcaaggggctgaccctcggccagttcgctcacgaaaagaagaccgcc
gatccgcccgtcgacacctcgcacctgtcgcctgcggaacaagcgttgttggaccgtccg
atctccgatctgaacctgtcggttcgtgctcgtaagtgcatggtccgcttgggactgaac
acgatcggcgaactgcttcgcaagaccgccgacgaactgctcgaatgcaagaacttcggc
gtgaccagcttggttgagattcgcgagaagctcgaacagcacaacctgacgctccgcggc
gagtaa
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