KEGG   Roseovarius faecimaris: EI983_00365
Entry
EI983_00365       CDS       T06338                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
rom  Roseovarius faecimaris
Pathway
rom02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rom00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    EI983_00365
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:rom02022]
    EI983_00365
Two-component system [BR:rom02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   EI983_00365
SSDB
Motif
Pfam: Response_reg Sigma54_activ_2 Sigma54_activat HTH_8 HTH_30 RuvB_N HTH_28
Other DBs
NCBI-ProteinID: QGX96812
UniProt: A0A6I6IKK4
LinkDB
Position
19640..20863
AA seq 407 aa
MIARVLLVDDDASVREALGQTLMLAEYEVTTAGSVIEAKDHIAPGFEGVVISDIRMPGQD
GFALLAHVRKVDADLPVILLTGEGDIPMAVRGMSDGAYSFLEKPCPPKELLAVVERAMQT
RALVMENRALKSQLETGDAASRLLFGSSALANGLRDSVRAAARAGTDVLITGAPGTGIAK
VAHVVHVLSRRDATFEKRAGAALNPTALAEALALTADGSLFIDEVGNLPADSQLALNEAQ
DAGHAPRIIAGTSRDLAQEAHAGRFNPDLFYRLNVMSVTIPALKDRPEDIPVLFRHYVQA
AAEQAQIAPPEIPPEVISRLMLRDWPGNSRDLMNAATRYVLGLSDFDSGEVPGLTEQMAQ
VEAAFLMQALRQNHGNATEAARALKLPRKTFYDKLARHGIRAEAFRE
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgatcgcacgggttcttctggtggatgacgacgcctcggtgcgcgaggcgctggggcag
acgctgatgctggcggagtatgaggtgaccaccgcgggcagcgtgatcgaggcgaaggat
catatcgcgcccggtttcgaaggcgtggtgatctcggacatccggatgccggggcaggat
ggctttgcccttctggcccatgtccgcaaggtcgatgcggatctgccggtgatcctgctc
accggtgaaggcgatattcccatggcggtgcgcggcatgtcggacggcgcctatagcttt
ctcgaaaaaccttgcccgccgaaagagcttctggcggtggtcgagcgggccatgcagacg
cgggcgctggtgatggaaaaccgggctttgaagtcacagcttgagacaggtgacgctgcg
tcgcgtttgcttttcggaagctcggcgctggccaatggtctgcgtgacagcgtgcgcgcc
gcggcccgcgccgggaccgatgtgctgatcaccggtgcgccggggacaggcatcgccaag
gtcgcgcatgtcgtgcatgtgctgtcgcgccgcgatgcaacctttgaaaaacgcgcaggc
gcggcgctgaacccgaccgcgctggccgaggcgctggcgctgacggctgatggttctctc
ttcatcgacgaggttggcaacctgcccgccgacagccagcttgccctgaatgaggcgcag
gacgccgggcatgcgccccgtatcattgccggcacttcccgcgatctggcgcaggaggcg
catgcgggccggttcaatcccgatctgttctatcgcctgaatgtgatgagcgtcaccatc
ccggcgctcaaggaccggcccgaagatattccggtgctgttccggcactatgtgcaggct
gctgccgaacaggcgcaaatcgcccctcccgagataccgcccgaggtgatcagccgcctt
atgctgcgcgactggccgggcaacagccgtgacctgatgaatgccgcgacgcgctatgtt
ctggggttgagcgattttgacagcggcgaggtgccggggctgaccgagcagatggcgcag
gtcgaagcggcgtttctcatgcaggcgctgaggcagaaccacggcaatgcgaccgaggcg
gcgcgtgcgttgaaactgccgcgcaagaccttctatgacaagcttgcccggcatggcatc
cgggccgaggcgtttcgggaatga

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