KEGG   Roseovarius faecimaris: EI983_04250
Entry
EI983_04250       CDS       T06338                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rom  Roseovarius faecimaris
Brite
KEGG Orthology (KO) [BR:rom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rom03400]
    EI983_04250
Enzymes [BR:rom01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EI983_04250
    5.6.2.6  RNA 3'-5' helicase
     EI983_04250
DNA repair and recombination proteins [BR:rom03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    EI983_04250
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QGX97531
UniProt: A0A6I6INZ9
LinkDB
Position
complement(800266..802674)
AA seq 802 aa
MTRLPDQISKWFAARGWSVHSHQQAMLERAEDPALLLIAPTGGGKTLAGFLPTLADLATG
DHRGLHTLYISPLKALAADIKRNLRTPVDEMGLPIRIEDRTGDTPASRKKRQRADPPHIL
LTTPESLALLTSYEDAPRMFAGLKRVVVDEIHALAESKRGDQLFLALSRLQAMCPGLRRV
GLSATVEDPGAIAGLLACHPDPCEILQADPGPDPDISMLETKEKPPWAGGGAAYAIPAVM
DQIKAHTTTLIFHNTRAQAEIFFHNLWLANDDGLPIGIHHGSLDRVQRERVEAAMQRGEL
RAIVCTGSLDLGIDWGDVDLVIQIGAPKNVKRLVQRIGRANHRYNAPSKALLVPANRFEV
IECHAALEAVRAHDLDGDPRGPGPRDVLCQHILIRACAGPFDADTLFAEVISSGAYTGLT
RPEFDACLTFCATGGYALRAYDQWQRLQQRPDGLWQLRDPRAAQLIRMNIGTIQDTDTLK
VRLKRNRGGKPLGEVEEGFAATLSPGDTFLIGGQIVRFESLREMVVEVSRDPGRKPKIAT
FMGTKFATSTQLSQRILALLKAGDWSALPSHTQEWLELQAELSQLPRAGRLLIESFKQDG
RENICVYGFAGRNAQQTLGLLLTKRMEEMGLAPLGFVATDYATLIWGLDRLTDAGPLFEP
DKLRAGLDQWLAGNALMKRTFRSSATIAGLIQRNTPQARKSGRQANMSSDIIYDTLVKYD
PDHLLLRITREEAMRGLIDFGRIEEMLSRISGRIDLLRLPHISPFAAPLLLEVGKTPVQG
EGHERLLAEEASRLMQEAGLPP
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgacacgccttcccgatcagatatccaaatggttcgccgcacgcggctggtccgtccac
tcgcatcagcaggccatgctggagcgcgccgaagatcccgcgctgctgcttatcgcaccc
accgggggcggcaagacactggccggtttcttgccgacgctggctgacctggcgacgggc
gaccaccggggccttcacacgctctatatctctccgctgaaggcgcttgcggcagatatc
aagcgcaatctgcgcacgcccgtcgatgagatgggcctgccgatccggatcgaggaccgc
accggcgacacacccgccagccgtaagaaacgccagcgggcagacccgccgcatatcctg
ctgaccacgcccgaaagccttgcattgctgacctcctacgaggacgcaccgcgcatgttt
gccggtctcaaacgcgtggtggtcgatgagattcatgcccttgccgaaagcaaacgcggc
gatcagcttttcctcgcgctcagccgccttcaggccatgtgccccgggctcaggcgcgtg
ggcctttcggccacggtggaagatccgggcgccatcgccgggcttcttgcatgtcacccc
gacccctgtgagatcctgcaggccgacccgggcccggacccggacatttcgatgctggaa
accaaagaaaaacccccctgggccggtgggggcgccgcctatgcgatcccggctgtgatg
gatcagatcaaagcccataccaccacgctgatctttcacaacacgcgtgcgcaggcagaa
attttctttcataatctgtggcttgccaatgatgatgggttacctatcggaattcatcac
ggcagccttgaccgggtacagcgcgagcgggtcgaagcggcgatgcagcgtggcgaacta
cgcgcgattgtctgcaccggaagcctcgatctggggatcgactggggcgatgtggacctt
gtcattcagattggtgcgccgaaaaacgtcaaacgtctggttcagcggatcgggcgggcc
aatcaccgctacaatgcgccttcaaaggcgttgctggtgcctgccaaccggttcgaggtg
atcgagtgccatgccgcgcttgaagccgtgcgcgcccatgatcttgacggcgacccgcgc
gggccgggaccgcgcgatgtgctgtgccagcatatcctgatccgggcctgcgcggggcca
ttcgacgccgatacgctctttgcggaggtcatctccagcggggcctatacaggcctgaca
cgtcctgaattcgatgcctgcctgaccttctgcgccaccggcggctatgccctgcgcgcc
tatgatcaatggcagaggcttcagcagcgccccgacgggctctggcaattgcgcgacccg
cgcgcggctcagctcattcgcatgaatatcggcacgatccaggacacggatacgctcaag
gtgcggctcaagcgcaaccgggggggcaagccgctgggcgaggtcgaggaaggctttgcc
gcaacgctcagccccggcgacacctttctcatcggcggacaaatcgtgcgcttcgagagc
ctgcgcgagatggtggtggaggttagccgtgaccccggccgcaagcccaagatcgccacg
ttcatgggcaccaagttcgccacgtccacgcagctcagtcagcgcattctcgccctgctg
aaagccggtgactggagcgccctgccctctcatacacaggagtggctggagctgcaggca
gagctgtctcaactgccccgcgccgggcggcttctgatcgaaagcttcaaacaggacggg
cgcgaaaatatctgcgtttatgggtttgcggggcggaacgcacagcagaccctgggcctt
ctgctgaccaaaagaatggaagagatggggctggcaccgctcggcttcgtggccaccgat
tatgccacgctgatctgggggctggaccggctgaccgatgcgggcccgctttttgagcct
gacaagctgcgcgccgggctggaccaatggctggcaggtaacgctttgatgaaacggact
tttcgaagctcggccacgattgccgggctgatccagcgcaatacgccccaagcgcgaaag
tctgggaggcaggcgaacatgtcctctgacatcatctacgacacgctggtgaaatacgac
cccgatcacctcctgttacggatcacgcgcgaggaggcaatgcgagggctgatcgacttt
ggcaggatcgaagagatgctgtcgcggatatccggccggattgaccttctgcgcctgccc
catatctcgcccttcgccgccccgctgctgctggaggtgggcaaaaccccggttcagggc
gaaggacacgagcggcttctggcagaggaggcgtcgcggctcatgcaggaggcgggcctg
ccaccctga

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