Roseovarius faecimaris: EI983_11970
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Entry
EI983_11970 CDS
T06338
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rom
Roseovarius faecimaris
Pathway
rom03420
Nucleotide excision repair
rom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EI983_11970
03430 Mismatch repair
EI983_11970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rom03400
]
EI983_11970
Enzymes [BR:
rom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EI983_11970
DNA repair and recombination proteins [BR:
rom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EI983_11970
MMR (mismatch excision repair)
Other MMR factors
EI983_11970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
QGX98949
UniProt:
A0A6I6IPG8
LinkDB
All DBs
Position
complement(2350960..2353302)
Genome browser
AA seq
780 aa
AA seq
DB search
MSSFDDSDAFEGASLAARAMAARPAPYLDSLNPAQREAVERLDGPVLMLAGAGTGKTKAL
TTRIVHLLNTGRAAPNEILAVTFTNKAAREMKHRVGSMMGQAIEGMPWLGTFHSICVKLL
RRHAELAGLKSNFTILDTDDQLRLLKQLVQAAGIDDKRWPARALAAVIDNWKNRAWTPEQ
VPASEASAYNDKGIALYAQYQTRLKELNAVDFGDLLLHMVTIFQAHEDVLAQYQRWFCYI
LVDEYQDTNVAQYLWLRLLAGGHKNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAHVV
RLEQNYRSTAHILAAASGVIAGNKGRLGKELWTDAEGGEKVRLIGHWDGEEEARWIGEEI
EAMQRGTRGMDPLSLDDMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERMEIRDAM
AYFRLVVSPSDDLAFERIVNTPKRGLGDVAQQKIQRAARANGVPLVEGAAILLEEKGLGG
KGAAELARLLTCLSRWGRMVGDKSLSHVELAEIILDESGYTEMWQNDKTPEAPGRLENLK
ELVKALEQFENLQGFLEHVSLIMDNESEDVAEKVSIMTLHAAKGLEFPAVFLPGWEDGLF
PSQRSMDESGLKGVEEERRLAYVGITRAEQLCTISFAGNRMVYGQWQSQMPSRFIDELPE
DHVEVLTPPGLYGGGYGAAGMQSSIEEKAARADVYNSPGWKRMQARAGQRPVSQPSEAKN
VVIDMAATSAHIVGERVFHQKFGYGLIIAIEGDKLEIDFEKAGTKKIVARFVTGADDIPF
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttttgacgattccgacgcctttgaaggcgcctccctggccgcgcgcgcgatg
gcggcgcgcccggccccgtatctcgacagcctgaaccccgcgcagcgcgaggcggtggag
cggctcgatggtccggtgctgatgctggccggggcagggacgggcaagaccaaggcgctg
accacccgcattgtgcacctgctgaacaccgggcgtgcggccccgaacgagatcctcgcc
gtgaccttcaccaacaaggccgcgcgcgagatgaagcaccgcgtgggctcaatgatggga
caggcgatcgagggcatgccgtggctgggcacgtttcactcgatctgcgtgaagctcttg
cggcggcatgccgagctggccgggctgaaatcgaactttaccattctggatacggatgat
cagctgcgcctgctgaaacaactggtgcaggccgcgggcatcgacgacaaacgctggccc
gcccgtgccctggcggcggtgatcgacaactggaagaaccgcgcctggacgcccgaacag
gtgcccgcgtcagaggccagcgcgtataatgacaagggcatcgcgctttatgcgcagtac
cagacccgcctgaaagagctgaacgccgtcgattttggcgatctgcttttgcatatggtg
acgatctttcaggcgcatgaggatgtgctggcgcaatatcagcgctggttctgctatatc
ctcgtggacgagtatcaggacacgaacgtggcgcaatatctgtggctgcggctgctggcg
ggcgggcacaagaatatctgctgcgtgggagatgacgatcagtcgatctatggctggcgc
ggcgcggaggtgggcaatatcctgcggtttgaaaaggattttcccggcgctcacgtggtc
cggctggagcagaattaccgctctaccgcgcatatcctggccgccgcctcgggtgtgatc
gcgggcaataagggtcggctgggcaaggagctttggaccgatgcggaaggtggcgagaag
gtccgtctgattggccattgggacggtgaggaagaggcgcgctggatcggcgaggagatc
gaggcgatgcagcgcggcacgcgggggatggatccgctgagccttgacgatatggccata
cttgtgcgcgcctcgcaccagatgcgcgccttcgaggaccggtttctgaccatcggcctg
ccttaccgtgtgatcggcggcccgcgcttttacgagcggatggagatccgcgatgcgatg
gcctatttccggctggtggtcagcccgtccgatgacctcgcctttgagcggattgtgaac
acccccaagcgcggcctgggcgatgtcgctcagcaaaagatccagcgggccgcgcgcgcg
aatggcgtgcctttggtcgagggtgccgcgatcctgctggaggaaaaggggctcggcggc
aagggcgcggcggagctcgccaggctcttgacgtgcctgtctcgctgggggcggatggtc
ggcgacaagagcctcagccatgtggaactggccgagatcatccttgacgaaagcggctac
accgagatgtggcagaacgacaagacacccgaagcgccggggcgtctggaaaacctcaag
gagcttgtcaaagcgttggagcagttcgagaatctgcaagggtttctggaacatgtcagc
ctgatcatggacaatgaaagcgaggacgtggccgagaaggtttcgatcatgaccctgcat
gccgccaagggtctggaatttccggccgtgttcctgccgggatgggaggacgggcttttt
ccctcacagcggtcgatggacgaaagcgggctgaagggtgtggaggaggagcggcggctg
gcctatgtgggcatcacccgggccgaacagctctgcaccatttcctttgcgggcaaccgg
atggtctatggccagtggcaaagccagatgccgtcgcgtttcattgacgagttgcccgag
gatcatgtcgaggtgctgaccccgccggggctctatggcggtggatacggggcggcgggc
atgcaaagcagcatcgaagagaaagccgcgcgcgccgatgtatacaactctccggggtgg
aaacggatgcaggcccgcgccgggcaacgcccggtcagccagccgtcggaggccaagaac
gtggtgatcgacatggccgccacctcggcgcatatcgtgggggagcgggtgtttcatcag
aaattcggatacgggctgatcatcgccatcgagggcgacaagctggagatcgacttcgag
aaagcgggcaccaagaagattgtcgcgcgatttgtgaccggggcggatgatattccgttc
tga
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