Roseovarius faecimaris: EI983_18130
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Entry
EI983_18130 CDS
T06338
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rom
Roseovarius faecimaris
Brite
KEGG Orthology (KO) [BR:
rom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rom03016
]
EI983_18130
Enzymes [BR:
rom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EI983_18130
Transfer RNA biogenesis [BR:
rom03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EI983_18130
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QGY00078
UniProt:
A0A6I6IXB7
LinkDB
All DBs
Position
3663241..3663852
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AA seq
203 aa
AA seq
DB search
MANHFYKRDLPDGLTLGPVVAIDCETMGLNPHRDRLCVVQMSGGDGDAHLVQIEQGQTNA
PNLTAMLEDPDVLKLFHFGRFDIAAMLNAFGALTAPVYCTKIASKLVRTYTDRHGLKYLL
QELLGVDISKQQQSSDWGAAELTEAQLDYAASDVLYLHRLREELDARLAREGRTELAQAC
FDFLPTRARLDLVGWPEIDIFAH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccatttctacaaacgcgatctgccggatggcctgacgctcggaccggtggtg
gccattgactgcgagacgatggggctcaatccccaccgcgaccggctctgtgttgtgcag
atgtctgggggggatggcgatgcgcatctggtgcagatcgagcagggccagacaaacgcg
cccaacctcacggccatgttggaagatccggacgtgctcaagctatttcactttggccgg
tttgacatcgccgcgatgctgaacgcctttggcgcgctgaccgccccggtttattgcact
aagatcgccagcaagctggtacggacctatacggatcgtcacggactaaagtatctcctg
caagaactgcttggcgtggacatctccaaacagcagcaaagctctgactggggtgcggca
gaactgacggaggcacagcttgactatgccgcatccgatgttctctatctgcaccgtctt
cgcgaagagctggatgcccggcttgcccgcgagggccgcaccgagctggcgcaagcctgc
ttcgatttcctgccgacgcgggcaaggctcgaccttgtcggctggcccgagatcgacatc
tttgcccactga
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