Raoultella ornithinolytica S12: TE10_00700
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Entry
TE10_00700 CDS
T03629
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ron
Raoultella ornithinolytica S12
Brite
KEGG Orthology (KO) [BR:
ron00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ron03021
]
TE10_00700
Transcription machinery [BR:
ron03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TE10_00700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
HTH_3
SANT_DAMP1_like
WASH_WAHD
HTH_25
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AJF70663
LinkDB
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Position
complement(135226..136080)
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AA seq
284 aa
AA seq
DB search
MTKDMQTLALAPVGNLESYIRAANTWPMLSADEERELAEKLHYQGDLEAAKRLILSHLRF
VVHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDM
TFDMSSDDESDSQPMAPVLYLQDKTSNFADGIEDDNWEEQAANKLTDAMQGLDERSQDII
RARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRTAIEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagatatgcaaactttagccttagcccccgttggtaacctggaatcctacatc
cgggctgcgaacacatggccgatgttatcggccgatgaagagcgggagcttgctgaaaag
ctgcattaccagggcgatctggaagcagcgaaaaggctgatcctgtctcacctgcgcttt
gttgttcatattgctcgtaactactcgggctatggcctgccgcaggcggacctgattcag
gaaggcaacattggcctgatgaaagccgtgcgccgttttaatccggaagtcggcgtgcgc
ctggtctcctttgccgtgcactggattaaggccgaaattcacgaatacgttctgcgtaac
tggcgtattgtgaaagtcgcgaccaccaaagcccagcgtaagctgttctttaacctgcgt
aaaaccaagcagcgtctgggctggtttaaccaggatgaagttgaaatggttgcccgcgag
ctgggcgtatcaagcaaagacgtgcgtgagatggaatcacgtatggcggcgcaggatatg
accttcgacatgtcgtcggacgacgagtccgatagccagccgatggctccggtgctctat
ctgcaggataaaacgtctaactttgccgacggcattgaagacgataactgggaagagcag
gcggcaaacaagctgaccgacgcgatgcagggcctcgacgagcgtagccaggatatcatc
cgcgcccgctggctggacgaagacaacaagtccacgctgcaggagctggcggatcgctac
ggcgtttcggctgagcgcgtgcgccagcttgaaaagaacgccatgaagaaactgcgtacc
gctatcgaagcgtaa
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