Raoultella ornithinolytica S12: TE10_01045
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Entry
TE10_01045 CDS
T03629
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
ron
Raoultella ornithinolytica S12
Brite
KEGG Orthology (KO) [BR:
ron00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
TE10_01045
Enzymes [BR:
ron01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
TE10_01045
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Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
Motif
Other DBs
NCBI-ProteinID:
AJF70730
LinkDB
All DBs
Position
complement(207542..209548)
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AA seq
668 aa
AA seq
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MRVSRSLTIKQMAMVASVSMAFVLVFCSILLFHFVQQSRFTTATQLESIARSVREPLSAA
ILKADIPEAEAILGRIQPAGIVSRADVVLPNQFQALRMRFIPERPVPVMITRMFELPVQI
SLPIYSQERPANPQPLAYLVLQADSYRMYKFVMSTLSTLVTAYFLLVLVLTVSITWCINR
LIVRPLRKVARELNDVPQQERLGHQLTLPRLHHDDEIGMLVRSYNRNQQTLLRRYDELSL
QSTRFPVSDLPNKAFLMALLEQAVARPQTSALLVVACETLQDTAGVLKEAQREILLLTLV
EKLRSIIPSRMVLAQVSGYDFAILANGITEPWQAVTLSKQVLTAISERLPLHGIQLRPCA
SVGIAMFNGELSAEQLYRRAVSAAVAARRKGKNQIEFFDPLQMEKAQRRLMEEHDILAAL
DNQRFAIWLQPQVNIASGEVCGAEVLLRQRQEDGSWLLPPDLIERIEACGLIVPVGYWVM
EEACRQLAAWQSQGIMLPLSVNVSLLQLLHHDRGTEMLTLLSRYRIAPGTLIIEITESRR
LDDPRMVVSLLRPLREAGVRIALDDFGMGYAGLRQLQHMKSLPVDILKIDKAFIDMLPED
TSMVPAIIQLARGLNLRIVAEGVEREEQHRWLQEAGVDIGQGYLFGCALPQEAFAAQFLP
VNEEGASL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtcagccgctcacttacaattaaacagatggcgatggtcgcaagcgtgtccatg
gcatttgtattggtcttttgctctattttactctttcactttgtgcaacagagtcgcttt
actacggccacgcagttagaaagcatcgcccgttccgttcgcgagccgctctctgcggcg
atcctgaaggcggatattcctgaggcggaagccattctcggtcgtatccagcccgccggc
atcgtcagccgggcggacgtggtgctgccgaaccagttccaggcgctgcggatgcgcttt
attcccgagcgcccggttccggtgatgattacccgcatgtttgagctgccggtacagata
tcgctgccgatctactcccaggaacgccccgcgaacccgcagccgcttgcctatctggtg
ctgcaggccgactcataccggatgtataaattcgtgatgagtacgctttctacgttagtg
actgcttactttctgctggtgctggttctgacggtgtcgatcacctggtgcatcaaccgg
ctgatcgtccgtccgctgcgtaaggtggcgcgtgaacttaacgacgttccgcagcaggag
cgtctcgggcatcagctgaccctgccgcggctgcatcacgatgatgagataggcatgctg
gtgcgcagctacaatcgcaaccagcaaaccctgctgcgccggtacgatgagctctcttta
cagtccacccgcttcccggtctccgacctgccgaataaggccttcctgatggcgctgctc
gagcaggcggtggcccgcccgcaaacctcggcgctgctggtggtcgcctgcgaaacgctg
caggacaccgccggcgtcctgaaggaggcccagcgcgaaatattgctgctgacgctggtg
gaaaagctgcggtcaatcatcccctcgcgcatggtgctggcgcaggtcagcggctatgac
tttgcgattctggccaacggcattaccgagccctggcaagcggtgacgttaagtaagcaa
gtgctcactgcaatcagcgagcgtctgccgctgcacggtatccagcttcgcccctgcgcc
agcgtcggaattgcgatgtttaacggcgagctgagcgcggagcagctctaccgacgcgcg
gtttccgctgccgtcgccgcgcggcgcaaaggtaaaaaccagattgagttcttcgatccg
ctgcagatggagaaggcccagcgccggctgatggaagagcacgatattctggcggcgctg
gataatcagcgtttcgccatctggctgcagccgcaggtgaatatcgccagcggcgaagtg
tgcggcgcggaggttctgctgcgccagcgccaggaggatggcagctggctgctgccgccg
gatctgattgaacgcattgaggcctgcgggctgattgtcccggtcggctactgggtgatg
gaagaggcctgtcgccagcttgcggcatggcaaagccagggcattatgctgccgctatcg
gtgaacgtgtcgctgctgcagctgctgcatcacgaccggggaacggagatgctgaccctg
ctgtcgcgctatcgcattgcgcctggcacgctgattatcgaaattaccgaaagccgccgg
ctggacgatccgcggatggtcgtctccctgctgcgcccgctgcgcgaggccggggtgcgc
atcgccctcgatgattttggcatgggttacgccgggttgcgccagctccagcatatgaag
tcgctgccggtcgatatcctgaaaatcgataaggccttcatcgatatgctgcccgaagat
accagcatggtgccggcgattattcagctggcgcgcggccttaacctgcgcattgtggcg
gaaggcgttgagagagaggagcagcaccggtggctgcaggaagccggcgtcgatatcggc
cagggctacctcttcggttgcgctttaccgcaggaggcgtttgcggcgcagtttttgccg
gtgaatgaagagggtgcaagcctgtaa
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