KEGG   Raoultella ornithinolytica S12: TE10_02490
Entry
TE10_02490        CDS       T03629                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ron  Raoultella ornithinolytica S12
Pathway
ron03030  DNA replication
ron03410  Base excision repair
ron03420  Nucleotide excision repair
ron03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ron00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TE10_02490
   03410 Base excision repair
    TE10_02490
   03420 Nucleotide excision repair
    TE10_02490
   03440 Homologous recombination
    TE10_02490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ron03032]
    TE10_02490
   03400 DNA repair and recombination proteins [BR:ron03400]
    TE10_02490
Enzymes [BR:ron01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TE10_02490
DNA replication proteins [BR:ron03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     TE10_02490
DNA repair and recombination proteins [BR:ron03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     TE10_02490
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     TE10_02490
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH Prok-E2_E HHH_5
Other DBs
NCBI-ProteinID: AJF70999
LinkDB
Position
531099..533885
AA seq 928 aa
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYQPTHAVV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHTMVKAMGLPLMAVPGVEADDVIGT
LAREAEKAGRPVLISTGDKDMAQLVTPGITLINTMTNTILGPDEVVTKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEAEKIAGLSFRGAKTMAAKLEQNK
EVAYLSYQLATIKTDVELDLSCEELLVLEPAADDLLTLFKKYEFKRWITDVESGKWMQAK
GSKPAAKPAQAAVAEEEVVEAAATLSAENYVTILDEETLTAWIEKLKKAPLFSFDTETDS
LDNISANMVGLSFAIEPGVAAYVPVAHDYLDAPDQIPRDRVLELLKPLLEDNSLLKVGQN
LKYDRGILANYGIELRGIAFDTMLESYILDSVAGRHDMDSLSDRWLQHKTITFEEIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPKLQQHEGPLHVFKNIEMPLVPVLSRV
ERNGVKIDPAVLHAHSQEIAKRLVELEQKAYEIAGEEFNLSSPKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPQDYLIVSADYSQIELRIMAHLSRD
NGLLTAFAEGKDIHRATAAEVFSLPLESVSSEQRRSAKAINFGLIYGMSAFGLARQLNIP
RREAQKYMDLYFERYPGVLDYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAGAE
RAAINAPMQGTAADIIKRAMIAVDEWLLTEKPRVRMIMQVHDELVFEVHKDDLESVAKKV
HELMENSTTLAVPLLVEVGSGENWDQAH
NT seq 2787 nt   +upstreamnt  +downstreamnt
atggttcagatccctgaaaaccctctcatcctcgttgacggctcctcttacctttaccgc
gcgtatcacgcattcccgccgctgaccaacagcgctggcgagccgactggcgcaatgtat
ggcgtgctgaatatgctgcgaagcctgatcctgcagtaccagcccacccatgccgtggtg
gtgtttgatgccaaagggaaaactttccgtgacgaactgtttgagcactacaaatcccac
cgcccgccgatgcccgacgatctgcgcgcgcagattgagccgctgcacacgatggtgaaa
gcgatgggcctgccgctgatggcggtaccgggcgtggaggctgacgatgtgattggcacc
ctggcgcgtgaggccgaaaaagcgggtcgcccggtattgatcagtaccggcgataaggac
atggcccagctggtcactccgggtatcactctgattaacaccatgaccaatacgatcctc
ggcccggatgaagtggtgacgaagtacggcgttccgccagagctgatcatcgatttcctc
gccctgatgggcgactcctcggataacattccgggcgttccgggagtcggagagaaaacc
gctcaggccctgctacagggattgggtggccttgatacgctgtatgccgaagcggaaaaa
atcgctggcctgagcttccgtggcgccaaaacaatggcggcgaagctcgagcagaataaa
gaggtggcctacctctcctatcagctggcgaccattaaaacagacgtggagctggatctg
agctgcgaagagctgctggttctggaaccggcggcggacgatctgctgacgctgttcaaa
aagtatgaattcaagcgctggataaccgacgtggagtccggcaaatggatgcaggcaaaa
gggagcaagcctgcggcaaaaccggcgcaagcggcggtggctgaagaagaggttgttgaa
gctgcggcaacgctgtctgccgaaaactacgtcaccattcttgatgaagagacgttaacg
gcgtggattgagaagctcaaaaaagcgccgctgttttctttcgatacggaaacggacagc
ctggataacatctcggccaacatggtcggcctgtcgttcgctatcgaacccggcgttgcg
gcctatgtgccggttgcgcatgattatctcgatgcgccggatcagatcccgcgcgatcgc
gtgcttgagctgctcaagccgctgctggaagataatagcctccttaaagttgggcaaaac
ctgaagtacgaccgcgggattttggcgaactatggcattgagctccgcggcattgccttc
gatacgatgctggagtcctacatccttgatagcgtggcggggcgtcatgacatggacagc
ctctccgatcgctggcttcagcataaaaccatcacctttgaagagattgccggcaaagga
aagaatcagcttacgtttaaccagattgcgttggaagaagcgggccgctatgcggctgaa
gatgccgacgttactctgcagctgcacctgaagatgtggccgaagctgcagcagcacgaa
gggccgctgcacgtatttaaaaacatcgagatgccgctggtcccggtgctatcccgcgtt
gagcgcaacggggttaaaattgatccggcggtgctgcacgcccattctcaggagatcgct
aagcgcctggttgagctggagcagaaggcctatgagatcgccggagaagagttcaatctc
tcctcaccgaagcagctgcaaacgattttgtttgaaaagcagggcattaaaccgctgaag
aaaaccccgggcggcgcgccatcgacttcggaagaggtgctggaagagctggcgctggac
tatccgctgccgaaggtgattcttgagtaccgtgggctagccaagctgaagtcgacgtat
accgataagctgccgctgatgattaaccccaaaaccggccgggtccatacctcataccat
caggccgttaccgctaccgggcgactctcttcaacggaccctaacctgcaaaatataccg
gtgcgtaacgaggaagggcgacgcattcgtcaggcgtttatcgcgccgcaggattatctc
atcgtctctgccgactactcgcagattgaactgcgcatcatggcccatttatctcgtgat
aatggcctgctgaccgcttttgctgaagggaaagatatccaccgggcgacggcggctgag
gtctttagcctgccgctggagagcgtcagcagcgagcagcgtcgtagcgctaaagcgatc
aactttggtttgatctacggcatgagcgcattcggcctcgcgcgccagctcaatattccg
cgcagagaagcgcaaaagtatatggatctctacttcgagcgctatccgggcgtgctggat
tatatggagcgcacccgcgcgcaggcgaaagagcagggatatgttgaaaccctggacggt
cgtcggctctatctcccggacatcaaatccagcaacggcgcacgtcgtgcaggcgctgag
cgagcggcaatcaacgcgccaatgcaggggacggcggcggatatcattaagcgggcaatg
attgccgttgatgagtggctgctgaccgagaagccgcgggtgcgaatgatcatgcaggtg
cacgatgaactggtctttgaagtgcataaagatgacctcgagagcgtggcgaaaaaggtc
catgaattaatggaaaacagcaccacgctggcggttccgctgctggtggaagtgggtagc
ggagaaaactgggatcaagcgcactaa

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