Raoultella ornithinolytica S12: TE10_03160
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Entry
TE10_03160 CDS
T03629
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ron
Raoultella ornithinolytica S12
Pathway
ron03420
Nucleotide excision repair
ron03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ron00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TE10_03160 (uvrD)
03430 Mismatch repair
TE10_03160 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ron03400
]
TE10_03160 (uvrD)
Enzymes [BR:
ron01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TE10_03160 (uvrD)
DNA repair and recombination proteins [BR:
ron03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TE10_03160 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
TE10_03160 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
DUF6658
Motif
Other DBs
NCBI-ProteinID:
AJF71118
LinkDB
All DBs
Position
674597..676789
Genome browser
AA seq
730 aa
AA seq
DB search
MPGCSFPAVPMDVSYLLDSLNDKQREAVAASRTNMLVLAGAGSGKTRVLVHRIAWLISVE
NCSPYSIMAVTFTNKAAAEMRHRIGQLMGTTQGGMWVGTFHGLAHRLLRAHHLDAGLPQD
FQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTW
QKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQY
AWIRLLAGDSGKVMIVGDDDQSIYGWRGAQVENIQRFLTDFPGAETIRLEQNYRSTNNIL
SAANALIENNSGRLGKKLWTDGADGEPISLYCAFNDLDEARFVVNRIKTWQENGGALEQC
AILYRSNAQSRVMEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERV
VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLKDKALAGRAASALQRFMELIDALAQ
ETADMPLHVQTDRVIKDSGLRIMYEQEKGEKGQTRIENLEELVTATRQFSYNDEDEDLMP
LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGVEEGMFPSQMALDEGG
RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEACVEEVRLRATV
SRPVSHQRMGTPMAENDTGYKLGQRVRHPKFGDGTIVNLEGSGEHSRLQVAFQGQGIKWL
VAAYARLETV
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
ctgccgggctgctcatttccggcggtgccaatggacgtttcttacctgctcgacagcctt
aatgataaacagcgtgaagccgtcgcggcctcgcgcaccaatatgctggttctggctgga
gcgggcagcggtaagacccgcgtactggtgcatcgcattgcctggcttatcagcgtagaa
aactgttcgccctactccattatggcggtgacctttaccaacaaagcggcggcggaaatg
cgccatcgtatcggccaactgatgggcaccacccagggcggcatgtgggtaggcaccttc
cacggcctggcgcaccgtctgctgcgtgcccaccatcttgatgccgggctgccgcaggat
ttccagatcctcgatagcgaagatcagctgcgcctgctgaagcggctgatcaaagcgatg
aacctcgacgagaagcagtggccgccgcgccaggcgatgtggtacatcaacagccaaaaa
gatgaggggctgcgcccgcaccatatccagagctacggcaatccggtggagcagacctgg
cagaaggtgtatcaggcctaccaggaagcctgcgatcgcgcagggctggtggattttgcc
gagctgctgctgcgcgcgcacgagctgtggctcaacaagccgcatattcttcagcactac
cgcgaacgctttaccaatatcctcgtcgacgaattccaggataccaacaatattcagtat
gcctggatccgtctgctggcgggcgatagcggcaaggtgatgatcgtcggcgatgatgac
cagtcgatctacggctggcgcggcgcgcaggttgagaatatccagcgcttcctgaccgat
ttccccggcgctgagaccattcgcctggagcagaactaccgctcaaccaacaatatcctc
agcgccgccaacgccctgattgaaaataacagcggacgtctgggcaagaagctgtggacc
gacggcgccgacggcgaaccgatctccctgtactgcgcctttaacgatctcgacgaagcg
cgtttcgtggttaaccggattaaaacctggcaggaaaatggcggggcgctggagcagtgc
gccatcctttaccgcagcaacgcccagtcgcgcgtgatggaagaagcgctgctgcaggcc
agcatgccgtaccgtatttacggcggcatgcgcttcttcgaacgtcaggagatcaaagat
gcgctctcctacctgcgcctgattgccaatcgcaacgatgacgccgcgtttgagcgcgtg
gtcaatacgccaacccgcggcatcggcgatcgcaccctggacgtggtgcgccaaacgtcg
cgggaccgccagctgacgctgtggcaggcgtgccgcgagctgctgaaagataaagccctc
gcgggccgcgccgccagcgccctgcagcgctttatggagctgatcgacgcgctggcgcag
gagacggcggatatgccgctgcacgtccagaccgaccgggtgattaaagattccggcctg
cgcatcatgtacgagcaggagaagggcgaaaaaggccagacgcgtatcgagaacttagaa
gagctggtgacggcaacgcgccagttcagctacaacgatgaagatgaggatttaatgccg
ctgcaggcgttcctttctcatgccgcgctggaggcgggcgaagggcaggctgatacctgg
caggatgcggtccagctgatgaccctgcactcggcgaaaggtctggagttcccgcaggtg
tttatcgtcggcgtggaggaggggatgttcccgagccagatggcgctcgacgagggcgga
cgcctggaagaagagcggcgccttgcctacgtgggcgtaacccgcgcgatgcagaagctc
acgctgacctacgccgaaacccgtcgcctgtacggcaaagaggtttaccatcgtccgtcg
cgtttcatcggcgagctgccggaggcgtgcgtggaagaggtgcgcctgcgcgccacggtg
agtcgtccggtgagccatcagcgcatgggcacgccgatggcggagaacgataccggctac
aaactgggtcagcgcgtgcgccatccgaaattcggtgacggcaccatcgtgaatctggaa
ggcagcggcgagcatagccgtctgcaggtggctttccaggggcagggcatcaaatggctg
gtggcggcctatgcgcggctggaaacagtgtaa
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