Raoultella ornithinolytica S12: TE10_03500
Help
Entry
TE10_03500 CDS
T03629
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ron
Raoultella ornithinolytica S12
Pathway
ron00730
Thiamine metabolism
ron01100
Metabolic pathways
ron01240
Biosynthesis of cofactors
Module
ron_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ron00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
TE10_03500
Enzymes [BR:
ron01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
TE10_03500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AJF71176
LinkDB
All DBs
Position
complement(748980..750875)
Genome browser
AA seq
631 aa
AA seq
DB search
MSTEKLTRRQQRERAQHFIDTLEGSVFPNSQRIYIQGSQDNIRVPMREIQLSPTLIGGGK
ENPRYEDNEAIPVYDTSGPYGDPDIAIDVHQGLAKLRQPWIDARNDSEPLSHRSSAYTQQ
RLADDGLDELRFSRLLTPKRAAAGRCVTQLHYARRGLVTPEMEFIAIRENMGRERIRSAV
LRHQHPGEGFGAHLPDNITPEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANI
GNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQAL
EKVNGIAEDLNWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPLTAKRLTGIVSRGGSIMA
KWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSVQDANDEAQFAELRTLGELT
KIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGI
GAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAM
SKARFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDY
AARQDIESGMADMSQDFRARGGEIYLRKEQA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagaaaaactgacccgtcgacagcagcgcgaacgcgcccagcactttatcgac
actcttgaaggttcggtcttccccaactcacagcgtatctacattcagggttcgcaggat
aatattcgcgtcccgatgcgtgaaatccagctcagccccacgcttatcggcggcggcaaa
gaaaatccgcgctatgaagacaacgaagcgatcccggtgtacgacacctccggcccctac
ggcgaccccgatattgcgatcgatgtccatcagggtctggcaaagctgcgccagccgtgg
attgacgcgcgtaacgatagcgagccgctcagccatcgcagctccgcctacacccagcag
cgcctggccgatgacggcctcgatgagctgcgctttagccgcctgctgacgccaaagcgg
gccgccgcaggccgctgcgtcacccagctccactacgcccgccggggcctcgtcacgccg
gagatggagtttatcgccatccgcgaaaacatgggccgcgagcgcattcgtagcgcagtg
ctgcgccaccagcatccgggagaggggtttggtgcccatctgccggacaacatcaccccg
gagtttgtccgtgacgaagtggccgccggccgcgccattattcccgccaatatcaaccat
cccgagtcggagccgatgattatcggccgtaatttcctggtcaaagttaacgccaatatc
ggcaactctgccgtcacctcgtccattgaggaggaggtggaaaagctggtgtggtcaacc
cgctggggagcggatacggtgatggatctctccaccggccgctatatccacgaaacccgc
gagtggatcctgcgtaacagcccggtgcctatcggtacggtgccgatctaccaggcgctg
gaaaaagtgaacggcattgccgaggatctgaactgggaagcgtttcgcgataccctgctg
gagcaggcggagcaaggcgttgactacttcaccatccacgccggcgtcctgctgcgctac
gttccgctgacggctaaacgcctcaccggtatcgtctcccgcggcggttcgatcatggcg
aaatggtgcctgtcgcaccatcaggaaaacttcctctatcagcacttccgcgaaatctgc
gaaatctgcgccgcctacgacgtctcgctctcgctgggcgacggtctgcgccccggatct
gtccaggacgccaacgatgaagcgcagtttgccgagctgcgaaccttaggtgagctgacg
aaaatcgcctgggagtacgacgtgcaggtgatgattgaaggcccgggccacgtgccgatg
cagatgatccgccgcaacatgaccgaagagctggagcactgccacgaagcgccgttctat
accctcgggccgttaaccaccgatatcgctccgggctacgatcacttcacttccggcatt
ggcgccgcgatgatcggctggtttggctgcgcgatgctctgctacgtgacgccgaaagag
cacctcgggctgccgaacaaagaggacgtgaagcaggggctgatcacctacaaaatcgcc
gcccacgccgccgacctcgccaaaggccatcccggggctcagatccgcgataacgccatg
tccaaagcgcgttttgagttccgctgggaggaccagttcaacctcgccctcgaccccttc
accgcccgcgcctatcacgatgaaaccctgccgcaggagtcgggaaaagtcgcccacttc
tgctccatgtgcggacccaaattctgttcaatgaaaatcagccaggaagtgcgcgactac
gccgcccgccaggatatcgaaagcggaatggccgatatgtcgcaggacttccgcgctcgc
ggcggcgaaatctatttacgtaaggagcaagcctga
DBGET
integrated database retrieval system
