Raoultella ornithinolytica S12: TE10_04515
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Entry
TE10_04515 CDS
T03629
Symbol
cpdB
Name
(GenBank) 2', 3'-cyclic nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
ron
Raoultella ornithinolytica S12
Pathway
ron00230
Purine metabolism
ron00240
Pyrimidine metabolism
ron01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ron00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
TE10_04515 (cpdB)
00240 Pyrimidine metabolism
TE10_04515 (cpdB)
Enzymes [BR:
ron01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
TE10_04515 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
TE10_04515 (cpdB)
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GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
Motif
Other DBs
NCBI-ProteinID:
AJF71363
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All DBs
Position
complement(963803..965746)
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AA seq
647 aa
AA seq
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MIKFSATLLATLVAASVNAATVDLRIMETTDLHGNMMDFDYYKDAATEKFGLVRTATLIE
KARQEVKNSVLVDNGDVIQGSPLGDYMAAKGLKSGDIHPVYKAMNTLDYAVGNLGNHEFN
YGLDFLHKALSGAKFPYVNANIIDVKTGQPMFTPYLIQDTKVEDSDGKTQTLRIGYIGFV
PPQIMTWDKANLAGKVTVNDITETARKFVPQMREKGADLVVVIAHSGLSADPYQAMAENS
VYYLSQVPGVDAIMFGHAHAVFPGIDFASIKGADISQGTLNGVPAVMPGMWGDHLGIVDL
ALSHKDGRWQVTQAKAEARPIYDPLAKKSLAAEDGNMVTVLKADHDATREFVSKPIGRAS
DNMYSFLALVQDDPTVQVVNMAQKAYVEHFIQGDPDLAKLPVLSAAAPFKVGGRKNDPAS
FVEVEKGQLTFRNAADLYLYPNTLVVMKVSGKEVKEWLECSAGQFNQIDPTSSKPQSLIN
WDGFRTYNFDVIDGVNYQIDVSQPARYDGECQMINPQAQRIKDLTFNGKAIDPAATFLVA
TNNYRAYGGKFAGTGDSHIAFASPDENRSVLAAWISAESKKAGAIHPAADNNWRLAPIHG
KVPLDIRFETAPTEKAAAFIKEQAQYPMRQVATDDIGFAIYQLDLSK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtttagcgcaacgctcctggccacgctggtcgctgccagcgtaaacgcggcg
acggtcgatttgcggatcatggaaaccaccgatctgcacggtaatatgatggattttgat
tattacaaagacgccgctacggaaaaatttggcctcgtgcgcaccgccacgctgattgaa
aaagcccgccaggaagtgaaaaacagcgtgctggtcgataacggcgacgttattcagggt
agtccactgggcgattatatggcggctaaaggtctcaaaagcggcgatattcacccggtt
tataaggccatgaacacgctggattacgccgtgggcaaccttggcaaccacgagtttaac
tacggcctcgatttcctgcacaaggccctctccggcgcgaaattcccctacgtcaacgcc
aacattatcgacgtaaaaaccggccagccgatgttcaccccgtacctgattcaggatacc
aaagtcgaggatagcgacggcaaaacgcagaccctgcgcatcggctatatcggcttcgtg
ccgccgcaaatcatgacctgggataaagccaatctcgccggcaaagtgaccgtcaacgac
atcaccgaaaccgcgcgcaaattcgttccacaaatgcgcgagaaaggcgcggacctggtg
gtggttatcgcccactcagggctctccgccgatccgtatcaggccatggcggaaaactcg
gtctactacctcagccaggttccgggcgttgatgccattatgttcggccacgcgcacgcg
gtattcccggggatagatttcgccagcatcaagggcgccgatatcagccagggcacgctt
aacggcgttccggccgtgatgcccggcatgtggggcgatcatttaggcatcgtcgatctg
gccctcagccacaaagacggcaggtggcaggtcacccaggcgaaggccgaagcccgccca
atctacgatccgctggcgaagaagtcgctggcggcagaagatggcaacatggtgacggtg
cttaaagccgaccacgatgcgacgcgcgaatttgtcagcaagcctatcggccgcgcctcc
gacaatatgtacagcttccttgcgctggtacaggacgacccgaccgtgcaggtggtcaat
atggcgcagaaagcctacgtcgagcactttattcagggcgatcctgacctggcgaagctg
ccggtgctctccgccgccgcgccgtttaaggtcggcggacgcaagaacgatcccgccagc
ttcgtcgaagtggagaaaggccagctcaccttccgcaacgccgccgatctgtatctctat
ccgaataccctggtggtaatgaaagtgagcggcaaggaggttaaagagtggctggagtgc
tctgccggacagttcaatcagatagacccgaccagcagcaagccgcagtcattaatcaac
tgggacggttttcgcacctataacttcgacgtgattgacggggtcaattaccagattgac
gtcagccagccggcgcgctacgacggcgagtgccagatgattaacccgcaggcgcagcgc
attaaggatctgacctttaacggcaaggccatcgacccggcggccaccttccttgtcgcg
acgaacaactaccgcgcctacggcggcaagttcgccggtaccggcgatagccatattgct
tttgcttccccggatgaaaaccgttcggtgctggcggcgtggattagcgctgagtcgaaa
aaggcgggggccatccacccggcggcggataacaactggcgcctggcgccgatccacggc
aaggtgccgctggacatccgctttgaaaccgcgccaaccgaaaaagcggcggcatttatt
aaagagcaggcgcagtacccgatgcgtcaggttgctaccgacgatatcggctttgccatt
tatcagctggacctgagtaagtag
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