Raoultella ornithinolytica S12: TE10_04720
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Entry
TE10_04720 CDS
T03629
Symbol
treR
Name
(GenBank) trehalose repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
ron
Raoultella ornithinolytica S12
Brite
KEGG Orthology (KO) [BR:
ron00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ron03000
]
TE10_04720 (treR)
Transcription factors [BR:
ron03000
]
Prokaryotic type
Helix-turn-helix
LacI family
TE10_04720 (treR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_23
HTH_31
HTH_IclR
HTH_3
HTH_7
MarR_2
Peripla_BP_4
AAA_18
HTH_Tnp_ISL3
MarR
SpoIIID
HTH_Crp_2
CENP-B_N
HHH
HTH_26
HTH_28
TrmB
Motif
Other DBs
NCBI-ProteinID:
AJF71403
LinkDB
All DBs
Position
complement(1012107..1013054)
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AA seq
315 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNESGVNERTRERVEAVMQQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPALVSEHLRILARRHVD
GVVLFGFTGITEEMLTPWRETLVLLARDAPGFASVCYDDDGAVRMLMQRLYDRGHRHISF
LGVPHSDVTTGQRRHQAYLDFCQQHRLTPTAALPGLAMKQGYENVASVLGADTSALLCAT
DTLALGASKYLQEQRIDSLQIASVGSTPLMKFLHPEILTVDPGYAEAGRQAARQLIEQIA
GNANPRQIVIPAALI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccggctgaccatcaaagatatcgcgcgcttgagcggcgtcgggaaatcgacg
gtatcgcgcgtgctcaacaatgaaagcggcgtcaacgagcgcacccgcgagcgggtggaa
gcggttatgcagcagcacggcttctcgccctcccgctccgcgcgcgcgatgcgcggtcag
agcgataaggtggtggcgattatcgtcacccgtctggactcgctgtcggaaaacctcgcc
gtgcagaccatgctgcccgctttttacgagcagggttacgatccgattatgatggagagc
cagttctccccggcgctggttagcgagcatctcaggatcctcgcccgccgccatgtcgac
ggcgtggtgctgtttggctttaccggcattaccgaagagatgctcacgccgtggcgcgaa
acgctggtgctgctggcccgcgacgcgccgggctttgcctcggtctgctacgacgacgac
ggggcggtgaggatgctgatgcagcgcctctacgatcgcggccatcgccatatcagcttc
ctcggggtgccgcatagcgacgtcaccaccggccagcgccgccatcaggcctacctcgat
ttctgccagcagcaccgcctcacgcccaccgccgcgctgccaggcctggcgatgaagcag
ggctatgaaaacgtcgccagcgtcctcggcgccgacaccagcgccctgctgtgcgccacc
gatactctcgcccttggcgccagcaagtatttgcaggagcagcgcatcgacagcctgcag
atcgccagcgtcggcagcacgccgctgatgaagttcctgcacccggaaattctcaccgtc
gatccgggctacgccgaggccggacgccaggcggcacggcagctgatcgaacagatcgcc
ggcaacgctaaccctcgtcaaatcgtcattcccgcggcgctgatttaa
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