Raoultella ornithinolytica S12: TE10_05955
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Entry
TE10_05955 CDS
T03629
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
ron
Raoultella ornithinolytica S12
Pathway
ron00220
Arginine biosynthesis
ron00240
Pyrimidine metabolism
ron00250
Alanine, aspartate and glutamate metabolism
ron01100
Metabolic pathways
ron01110
Biosynthesis of secondary metabolites
ron01240
Biosynthesis of cofactors
Module
ron_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
ron00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
TE10_05955 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
TE10_05955 (carB)
00220 Arginine biosynthesis
TE10_05955 (carB)
Enzymes [BR:
ron01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
TE10_05955 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
ATP-grasp_5
BamE
Motif
Other DBs
NCBI-ProteinID:
AJF71632
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All DBs
Position
1275661..1278885
Genome browser
AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATA
DAIDKAEDRRRFDVAMKKIGLDTARSGIAHTMEEALAVAADVGYPCIIRPSFTMGGTGGG
IAYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQVMRNASMAVLREIGVETGGSNVQFSVNPKDGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFVGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA
LTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVEEAG
INGLDADFLRMLKRKGFADARLAKLAGVREAEIRKLRDQYNLHPVYKRVDTCAAEFSTDT
AYMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVP
VIGTSPDAIDRAEDRERFQQAVDRLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVL
GGRAMEIVYDEVDLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGEMVLIGGIME
HIEQAGVHSGDSACSLPAYTLSQDIQNVMREQVQKLAFELQVRGLMNVQFAVKNNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMAGQTLAQQGVTKEIIPPYYSVKEVVLPFNKF
PGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSSSTMKKQGRALLSVREGDKERVVDL
AAKLLKFGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTEGR
QAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALNANAMEKVTSVQEMHAQIKK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacataaaaagcatcctgattcttggcgctggcccgatcgttatc
ggccaggcttgtgaatttgactactctggcgcccaggcctgtaaggccctgcgcgaagag
ggttaccgcgtcattctggtgaactctaacccagccaccatcatgaccgacccggaaatg
gccgatgccacctatattgagccgatccactgggaagtggtacgcaaaatcatcgaaaaa
gagcgtccggacgccgtactgccgaccatgggtggccagaccgcgctgaactgcgcgctg
gagctggaacgtcagggcgtgctggccgaattcggcgtgaccatgattggcgccaccgcc
gatgcgattgataaagcggaagaccgccgtcgcttcgacgtggcgatgaaaaaaattggc
ctcgacaccgcgcgttccggtatcgcgcacaccatggaagaagcgctggcggttgccgct
gacgtgggctatccgtgcatcatccgtccctccttcaccatgggcggaaccggcggcggt
atcgcctataaccgcgaagagtttgaagaaatctgtacccgcggcctcgatctctctcca
accaacgaactgctgatcgatgaatcgctgatcggctggaaagagtacgagatggaagtg
gtgcgcgataagaacgacaactgcatcatcgtctgctccatcgaaaacttcgacgcgatg
ggcatccataccggcgactccatcaccgtggccccggcgcagaccctgaccgataaagag
tatcaggtgatgcgtaacgcctcgatggcggtgctgcgcgaaatcggcgtggaaaccggc
ggttccaacgttcagttctcggtgaacccgaaagatggtcgcctgattgttatcgaaatg
aacccgcgcgtatcgcgctcgtcggcgctggcctcgaaagcgaccggcttcccgattgcc
aaagtggcggcgaagctggcggtgggctacacccttgacgagctgatgaacgacatcacc
ggcgggcgtaccccggcatcgttcgaaccctctatcgactacgtcgtcaccaagatcccg
cgcttcaactttgagaagttcgtcggcgctaacgaccgcctgaccacgcagatgaaatcg
gtcggcgaagtgatggcgattggccgcacccagcaggagtcgctgcagaaagcgctgcgc
ggcctggaagtgggcgcaaccggctttgaccctaaagtgagcctcgatgacccggaagcg
ctgaccaaaattcgccgcgagctgaaagacgccggcgccgagcgtatctggtacatcgcc
gacgccttccgcgcgggcctgtccgtcgacggcgtcttcaacctgaccaacatcgatcgc
tggttcctggtgcagattgaagagctggtgcgtctggaagagaaagtggaagaggccggc
atcaacggccttgatgctgacttcctgcggatgctgaagcgtaaaggctttgccgacgcg
cgtctggctaagctggcgggcgtgcgcgaagcggaaatccgcaagctgcgcgaccagtac
aacctgcacccggtctacaagcgcgtggatacctgtgcggcggagttctcaacggatacc
gcctacatgtactccacctatgaagacgagtgtgaagcgaacccgtcggttgaccgcgat
aaaattatggtgcttggcggcggcccgaaccgtatcggccagggtatcgaattcgattac
tgctgcgtgcacgcctcgctggcgctgcgcgaagatggttacgaaaccattatggttaac
tgtaacccggaaaccgtctctaccgactacgacacctccgaccgcctgtattttgagccg
gtgaccctcgaagacgtgctggaaatcgtgcgtattgagaagccgaagggcgttatcgtc
cagtacggcggccagactccgctgaagctggcgcgcgcgctggaagcggccggcgtgccg
gttatcggcaccagcccggacgcgattgaccgtgcggaagaccgcgagcgtttccagcag
gcggttgaccgtctgaagctgaaacagccggcgaacgccaccgtaaccgcgattgaaatg
gccgttgagaaggccaaagagattggctacccgctggtggtgcgtccgtcctacgttctt
ggcggtcgggcgatggaaatcgtttacgacgaagtcgacctgcgtcgctacttccagacc
gcggtaagcgtctctaacgacgcgccggtgctgctggaccgtttccttgacgatgcggta
gaagtcgacgttgacgctatctgcgacggcgagatggtgctgattggcggcattatggag
cacattgaacaggcaggcgttcactccggcgactccgcatgctcgctgccggcctacacc
ctgagccaggacatccagaacgtgatgcgcgagcaggtgcagaagctggccttcgagctg
caggttcgcggcctgatgaacgtgcagttcgcggtcaaaaacaacgaagtgtatctgatt
gaagtgaacccgcgcgcggcgcgtaccgtaccttttgtctccaaggccaccggcgttccg
ctggcgaaagtggcggcacgcgtaatggccggccaaacgctggctcagcagggcgtgacc
aaagagattatcccgccgtattactctgtaaaagaagtggtgctgccgttcaacaagttc
ccgggcgttgacccgctgttagggccagaaatgcgctctaccggggaagtgatgggcgtc
ggccgcacctttgcggaagcgttcgccaaggcgcagctgggcagcagctcgacgatgaaa
aaacagggccgcgcgctgctctccgttcgtgaaggcgacaaagagcgcgtggtggacctc
gcggctaagctgctgaagtttggtttcgaactggatgctacccacgggaccgcgattgtc
ctcggtgaagccgggatcaacccgcgtctggtgaacaaggtgcatgaaggtcgtccgcat
attcaggaccgtatcaagaatggcgaatacacctacatcatcaacaccaccgaaggtcgc
caggcgattgaagactccaagctgattcgccgcagcgccctgcagtacaaggtgcactac
gacaccaccctgaacggcggcttcgccacggcgatggcgctgaacgccaacgctatggag
aaggtgacctcggttcaggaaatgcacgcgcaaatcaaaaaataa
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