Raoultella ornithinolytica S12: TE10_09415
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Entry
TE10_09415 CDS
T03629
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ron
Raoultella ornithinolytica S12
Brite
KEGG Orthology (KO) [BR:
ron00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ron03400
]
TE10_09415
Enzymes [BR:
ron01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
TE10_09415
DNA repair and recombination proteins [BR:
ron03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
TE10_09415
Prokaryotic type
TE10_09415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AJF72274
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Position
2033489..2034931
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AA seq
480 aa
AA seq
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MATHLVWFRADLRIHDNLALAAACRDPDAHVLALFIATPEQWRQHGMAPRQAAFIVSHLR
SLQAALAERGIALQVAQATDFSASVALLARFCEEQQVSHLFYNYQYEINERQRDAAAEKT
LSRVVCQGFDDSLLLPPGSVLTGSREMYKVFTPFKNAFVRRLRETLPECVAAPKVRKNGP
LTPAVLPEIDYPQTAFDPLLFAADEKAAIAGLRAFCQHKAADYDQQRDFPALEGTSRLSP
CLATGVLSPRQCLHRLLVELPGALDGEGGSVWLNELIWREFYRHLMVYYPGLCKGRPFIA
WTDRVAWRDDAPGLQAWQEGRTGFPIVDAAMRQLNATGWMHNRLRMIVASFLVKDLRVDW
RAGERYFISQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDKAGRFIRQWL
PELAAVPEKALHQPWVWADKQGVTLAYPRPLVDHKQARLETLAAWEAASKGATPAPGGGS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggccacccatctggtctggtttcgcgcggatctgcgcattcacgataatctggcgctg
gctgcggcctgccgcgatcccgacgctcacgttctggcgctgtttatcgccacgcccgaa
cagtggcgtcagcacgggatggcaccgcgtcaggcggcgtttatcgttagccatctgcgc
agcctgcaggccgcgctggccgagcgcggtatcgccctgcaggtggcgcaggcgacagat
ttctccgccagcgttgccctgctggcccgcttctgcgaggagcagcaggtcagccatctg
ttttacaactatcagtatgaaattaacgagcgccagcgcgacgcggcggcggagaaaacg
ctgagccgcgtggtgtgccaggggtttgacgacagcctgctgctgccgcccggcagcgtg
ctgaccggcagtcgtgaaatgtataaggtgttcacgcccttcaaaaatgcctttgttcgc
cgcctgcgcgagacgctgccggagtgcgtggcggcgccgaaggtgcgtaaaaacgggccg
ctgacgcccgccgtcctgccggagattgactatccccagacggcgttcgatccgctgctg
tttgccgccgacgaaaaagcggccatcgccggcctgcgcgctttttgccagcacaaggct
gccgattatgaccagcagcgcgactttccggcgctggagggcaccagccggctttcgccg
tgtctggcgacgggcgtgctctcgccgcgccagtgtctgcatcgtctgctggtggagctg
cccggcgcgctggacggcgagggcgggtcggtgtggctcaatgagcttatctggcgcgag
ttctaccgccacctgatggtttactatccagggctgtgcaaggggcggccgtttatcgcc
tggaccgacagggtggcgtggcgcgacgatgcgccggggctgcaggcgtggcaggagggg
cgcaccggctttccgattgtcgatgccgcgatgcgtcaactcaacgcgacgggctggatg
cacaaccgcctgcggatgattgtcgccagttttctggtgaaggatctgcgcgtcgactgg
cgtgccggcgagcgctattttatcagccagctgatcgacggcgatttagccgccaataac
ggcggctggcagtgggcggcgtctaccggcaccgatgcggcgccctatttccgcatcttc
aaccccacgactcagggcgagaagtttgataaagcgggacggtttattcgccaatggctg
ccggagctggcagcggtgccggaaaaggccctgcaccagccgtgggtctgggccgataag
cagggcgtaaccctggcgtacccgcgcccactggtcgatcacaagcaggcgcggctggag
acgctggcagcctgggaagccgccagcaaaggcgctactccagcgccaggcggcgggtcc
tga
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