Raoultella ornithinolytica S12: TE10_09850
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Entry
TE10_09850 CDS
T03629
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ron
Raoultella ornithinolytica S12
Pathway
ron03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ron00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TE10_09850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ron03019
]
TE10_09850
Enzymes [BR:
ron01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TE10_09850
Messenger RNA biogenesis [BR:
ron03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TE10_09850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
AAA_22
P-loop_SecA
Cullin_binding
Motif
Other DBs
NCBI-ProteinID:
AJF72353
LinkDB
All DBs
Position
2121734..2123101
Genome browser
AA seq
455 aa
AA seq
DB search
MSFDSLGLNPEILRAVAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QHLIQQEPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNVRSLVVFGGVSINPQMM
KLRSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMGFIHDIRRVLSKLPAK
RQNLLFSATFSDEIKSLAEKLLHNPLEIEVARRNTASEQVSQYVHFVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLHDI
ERLLKKEIPRISVAGYEPDPSIRAEPIQNGRQQRSGGGGRGQGQGRGGQSQGRAGQSQGR
GQQSSPRRSDGDAPKARTQDGKPQRRRSRKPAAAE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggccttaatcctgaaatcctgcgtgccgtagccgaacagggt
tatgttgagccaacccccattcagcagcaggctatccctgcggtgttgcaggggcgcgat
ctgatggccagcgcccagaccggcaccggcaaaacggcgggctttaccctgccgctgctt
cagcatctgatccagcaagagccgcacgcgaagggccgtcgcccggtgcgcgcgctgatc
ctcacccctacgcgtgagctggccgctcagattggcgaaaacgttcgtgattacagcaag
tatctgaatgttcgctcgctggtggtattcggtggcgtgagcattaacccgcagatgatg
aagctgcgcagcggcgtcgatatcctggtggcaacgccgggtcgcctgctggatctggaa
caccagaacgccgtcagcctggataaggttgaagtgctggtgctggatgaagccgaccgg
atgctggacatgggctttattcatgatattcgccgtgtgctgtcgaagctgccggcgaag
cgccagaacctgctgttctcggcaaccttctccgacgagattaaatcgctggcggaaaag
ctgctgcataacccgctggaaatcgaagtcgcccgtcgcaatacggcctccgagcaggtg
agccagtacgtgcatttcgttgataagaagcgcaagcgcgagctgctgtcgcagatgatc
ggcgaaggcaactggcagcaggtgctggtctttacccgtaccaagcatggcgccaaccac
ctggcggaacagctgaacaaagacggcattcgcagcgccgccatccacggcaacaaaagc
cagggcgcgcgtacccgcgcattagctgattttaaatccggcggcattcgcgtgttggtg
gcgaccgatatcgccgcgcgcggcctggatatcgaagagctgccgcacgtggtgaactac
gagctgccgaacgtgccggaagattatgtccaccgtattggccgtaccggccgcgccgcc
gctaccggcgaagcgctgtcgctggtctgcgttgatgagcataagctgctgcacgatatc
gaacgcctgctgaaaaaagagatcccacgcattagcgttgccggctatgagccggatccg
tccatcagagcggagccgattcaaaacggtcgtcagcagcgcagcggcggcggtggtcgc
ggtcagggccagggacgcggcggccagagtcagggtcgcgccggtcagagccagggtcgt
ggtcagcagtcttcaccgcgccgcagcgacggtgatgcgccgaaagcgcgtactcaggac
ggcaaaccgcagcgtcgccgctcgcgcaagccagcggccgctgagtaa
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