Raoultella ornithinolytica S12: TE10_12590
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Entry
TE10_12590 CDS
T03629
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ron
Raoultella ornithinolytica S12
Brite
KEGG Orthology (KO) [BR:
ron00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ron03016
]
TE10_12590
Enzymes [BR:
ron01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
TE10_12590
Transfer RNA biogenesis [BR:
ron03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TE10_12590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
OSR1_C
ODP
Rho_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
AJF72855
LinkDB
All DBs
Position
complement(2722372..2724306)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGVVKGTEKGFGFLEVDSQKSYFIPPPQMKKVMHGDRI
TAVVHTEKERESAEPEELIEPFLTRFVGKVHKKDDRLSIVPDHPLLKDAIPCRADRSVSH
DFSEGDWAVAEMRRHPLKGDRGFYAELTQFITFSDDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLERRDLTALAFVTIDSASTQDMDDALYVEATADGKLQLTVAIADPTAWIAEGSR
LDDAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANETRPVLACRMILSADGTIEDDIEF
FAATIESKAKLAYDNVSDWLENSGSWQPESEAIAQQITLLQDLCLRRSEWRKTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDRLGFGVYNVHTGFD
PANTEQLAALLKTHDVHVDPQEVLTLNGFCKLRRELDAQPSGFLDSRIRRFQSYAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGDTIARPNDDVAVQMAERRRLNRM
AERDVGDWLYARYLSPNAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVKIAEVRMETRSVIARPFA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattctcagactcct
cgcgttgaaggggtcgttaagggtacggaaaaaggctttggcttcctcgaagttgactcg
cagaaaagctatttcattccgccgccgcaaatgaaaaaagtgatgcatggcgatcgtatt
accgccgtggtccatactgaaaaagaacgtgaaagcgcggagccggaagagttgatcgag
cctttcctgacgcgtttcgttggtaaagtgcataagaaagacgatcgcctgtctatcgtt
cccgatcatccgctgctgaaagatgccattccgtgccgcgccgatcgtagcgtcagccac
gatttcagcgagggtgactgggcggttgccgaaatgcgccgtcacccgctgaaaggcgat
cgcggcttctacgccgaattaacccagttcatcaccttcagcgacgaccatttcgtgccg
tggtgggttaccctggcgcgtcataatctggaaaaagaagcgccagacggcgtggctaca
gagatgctggacgaagggctggagcgccgcgacctgacggcgctggcgttcgtgaccatc
gatagcgccagcacccaggatatggacgatgcgctgtatgtggaagccaccgctgacggc
aagctgcagctgaccgtcgcgatcgccgacccgaccgcctggatagccgaaggcagcagg
ctggacgacgcggcaaaaattcgcgccttcaccaactacctgccgggctttaacatcccg
atgctgccgcgcgagctctccgacgacctgtgctcgctgcgcgccaacgaaacgcgcccg
gtgctggcctgccgcatgatcctctcggccgacggtacgattgaagatgatattgaattc
ttcgccgccaccattgagtcgaaagcaaagctggcctacgacaacgtctccgactggctg
gagaatagcggcagctggcagcccgaaagcgaagccatcgcgcagcagattacccttctg
caggacctgtgcctgcgccgcagcgaatggcgtaaaacccatgcgctggtgtttaaagac
cgtccggactaccgcttcgtgctgggtgagaaaggtgaagtgctggatatcgttgccgag
ccgcgccgtatcgccaaccgcatcgttgaagagtcgatgattgccgccaacatctgcgcc
gctcgcgtgctgcgcgaccgtctgggctttggcgtttacaacgtgcataccggcttcgat
ccggccaataccgaacagcttgccgcgctgctgaagacccatgacgtgcacgtcgatccg
caggaagtgctgaccctaaacggcttctgcaagctgcgccgcgagctggacgcacagccg
tccggcttcctcgatagccgcatccgtcgcttccagtcctacgccgaaatcagcaccgag
ccgggcccgcacttcggcctcggcctcgaagcctacgccacctggacctcaccgattcgt
aagtacggcgatatgattaaccatcgcctgctgaaagccatcattaaaggtgacaccatc
gcgcgccctaatgatgacgtagcggtgcagatggcagaacgccgtcgactgaaccggatg
gccgaacgcgacgtcggcgactggctgtacgcgcgctacctgagcccgaacgccggcacc
gatacgcgctttgcggcggaaattatcgatatcagccgcggcggcatgcgcgtacgcctg
gttgataacggcgcggttgcctttatcccggcaccgttcctgcacgccgtccgcgatgag
ctggtctgcagccaggaaaacggcaccgtgcagattaaaggtgaaaccgtctacaaggtg
accgacgttatcgacgttaagattgccgaagtcagaatggaaacgcgcagcgtgattgcc
cggccgttcgcctga
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