Raoultella ornithinolytica S12: TE10_18410
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Entry
TE10_18410 CDS
T03629
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ron
Raoultella ornithinolytica S12
Pathway
ron03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ron00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TE10_18410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ron03400
]
TE10_18410
Enzymes [BR:
ron01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TE10_18410
DNA repair and recombination proteins [BR:
ron03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TE10_18410
RecFOR pathway proteins
TE10_18410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
AAA_14
Rad17
AAA_16
nSTAND3
TIP49
AAA_2
AAA_18
RNA_helicase
AAA_17
NTPase_1
Bac_DnaA
NB-ARC
AAA_28
AAA_24
ABC_tran
TsaE
NPHP3_N
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
AJF73907
LinkDB
All DBs
Position
complement(3991814..3992824)
Genome browser
AA seq
336 aa
AA seq
DB search
MIEADRLVSADSTGFEETVDRAIRPKLLAEYVGQPQVRSQMEIFIQAAKLRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYQIADLQHIVSRSARFMGLEMSEEGALEVARRARGTPRIANRLLRRVRDFAEVRHDG
SISLDIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFLQRTPRGRMATVRAWNHFGIKPPEMP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcagacaggctggtatcggcagacagcaccgggtttgaagagacggtcgat
cgcgcaatccgccctaaactactggcagagtacgtgggccagccgcaggtgcgctcgcaa
atggagatctttatccaggcggcgaagctgcgcggagacgcgctcgaccatctgctgatc
tttggcccgccggggctgggaaaaacgacgctggccaacatcgtcgccaatgagatgggc
gtcaacctgcgcaccacctccgggccggtgctggaaaaagccggtgacctggcggcgatg
ctgaccaaccttgaaccccacgacgtgctgtttatcgatgaaattcaccgcctttcgccg
gtggtggaagaggtgctctatccggcgatggaggactatcagctggatatcatgattggg
gaagggcccgcggcgcgttcgataaaaatcgatctgccgccgttcaccctgattggcgcg
accacgcgggccggttcgttaacctcgccgctgcgcgaccgcttcggcatcgttcagcgg
ctggagttttatcagattgccgatctacagcacattgtgagccgcagcgcccgctttatg
gggctggagatgagcgaagagggcgcgctggaagtggcgcgtcgcgcgcgcggtaccccg
cgtattgccaaccgcctgctgcggcgggtgcgcgacttcgcggaagtgcgccatgacggc
agcatctctctcgacatcgccgcccaggcgctggatatgcttaacgttgacgccgaagga
tttgattatatggaccgcaagctgctgctggcggtgatcgataaattctttggtggcccg
gtcggcctggataacctggcggcggccattggcgaagagcgcgaaaccattgaagacgtg
ctggagccgtatcttatccagcagggcttcctgcagcgaacgccgcgggggcgcatggcg
acggtccgcgcctggaaccacttcggcatcaagccgccggaaatgccctag
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