Raoultella ornithinolytica S12: TE10_18675
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Entry
TE10_18675 CDS
T03629
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
ron
Raoultella ornithinolytica S12
Brite
KEGG Orthology (KO) [BR:
ron00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ron03400
]
TE10_18675
DNA repair and recombination proteins [BR:
ron03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
TE10_18675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
AJF75340
LinkDB
All DBs
Position
complement(4042822..4043286)
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AA seq
154 aa
AA seq
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MMDVHDKATRSKNMRAIGTFDTAIEKRLAGLLTQAGFSFTAQEATLPGRPDFVVSDYRCA
IFTHGCFWHHHDCYLFKVPATRTAFWLNKIDGNVTRDRRDEALLLERGWRVLIVWECALR
GKKKLSDEALSERLEEWICGGGHRAQIDTQGIGP
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgttcacgataaagccacccgcagtaaaaatatgcgcgccatcggcacattc
gatacggcgatagaaaaacgactggccggactgctcacgcaggccggtttttcttttacc
gctcaggaggctacgctgccggggcgcccggattttgtggtcagcgattaccgctgcgct
atctttacccacggctgcttctggcatcatcatgactgctacctgttcaaggtgccggca
acccgcacggcgttctggctgaataaaatcgacggcaacgtgacgcgagaccggcgggac
gaggcgctgctgcttgagcggggatggcgggtgctgatcgtctgggagtgcgcgctacgc
gggaagaaaaagcttagcgatgaagcacttagcgaacgcctggaggagtggatctgcggc
ggcggccaccgcgcgcagattgatactcagggaatcgggccgtag
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