Roseimicrobium sp. ORNL1: G5S37_05465
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Entry
G5S37_05465 CDS
T06460
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
roo
Roseimicrobium sp. ORNL1
Pathway
roo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
roo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G5S37_05465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
roo03000
]
G5S37_05465
03400 DNA repair and recombination proteins [BR:
roo03400
]
G5S37_05465
Enzymes [BR:
roo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
G5S37_05465
Transcription factors [BR:
roo03000
]
Prokaryotic type
Helix-turn-helix
AraC family
G5S37_05465
DNA repair and recombination proteins [BR:
roo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G5S37_05465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
GntR
HTH_28
RecR_HhH
HTH_23
HHH
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
QIF00987
UniProt:
A0A6G6K0K7
LinkDB
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Position
complement(1348415..1349887)
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AA seq
490 aa
AA seq
DB search
MIDPKAAYSALKSHDPRFDGVFYVGVTSTGIYCRPVCPVKTPQLKNCRFFESAEAAEKAA
FRPCLRCRPELAPGHAPVDNAHRIAHQISHRIDEGMLEDGAGLEEIAAQFEISSRQLRRI
VQKELGVSPIELLQTRRLLLAKQLLTETKLPVTEIAFASGFASLRRFNDAFSSQYRMPPT
RLRKEAAQEEHQIAIDAAGTSTLQLSYRPPYDWDGILEFLKGRMIKDVELVTSESYARTV
QLGKHTGWLKVTHAPEKHALMVEFTHSLAPVLPTLLGRLRNLFDLTARPDLIAAHLMRDK
TLKAAVKKNPGLRVPGAFDGFEMVIRAILGQQITVKAATTISCRFADAFGEKFETPFPEL
TRLTPLASRVARASVDDVAKLGIVSARSRTIIAIAEAFHSGSLKLEAGANPDTAIAQLVA
LPGIGPWTAHYIAMRALRWPDAFPKEDIAVRNNLGGVSAKQAEELSQAWRPWRSYAVMHV
WRNPPPPLKK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcccaaagccgcgtacagcgccctgaagtcccatgacccgcgattcgatggc
gtcttctacgtgggcgtcacctcgacgggcatctactgccggcccgtttgcccggtgaag
acgccgcagctcaagaactgccgcttcttcgaaagcgcggaggctgcggagaaggcagcg
ttccgtccgtgcctgcgctgccgtccagaactggcgccggggcatgcgccggtggacaat
gcccatcgcatcgcgcaccagatttcgcatcgcattgatgaaggcatgctggaggatggc
gccgggctggaggagatcgcggcacagtttgaaatcagctcgcggcagttgcgccgcatc
gtgcaaaaggagttgggtgtctcccccattgagctcttgcagacgcgtcggctcctgctg
gcgaaacaactgctcacggaaacgaagctgccggtgacggagattgcctttgccagcggc
tttgccagcttgcggcggttcaacgatgccttcagttctcagtatcgcatgccacccacg
cggttgcgcaaggaagcggcgcaagaggagcatcagatcgccatcgatgcggcgggcact
tcgactttgcagttgagctatcgcccgccctacgactgggacggcatcctggagttcctg
aaagggcgcatgatcaaggatgtggaacttgtcaccagtgagagctatgcgcgcaccgtg
cagttggggaaacacacgggctggctcaaggtgacgcacgcgccggagaagcacgcgctc
atggtggagttcacgcactcgctcgcgcctgtcctgccgacactgctgggcagactgcgc
aatctgtttgatctcaccgcgagaccggacctcatcgcggcgcacctgatgcgggacaag
acactgaaggccgccgtgaagaagaatcccgggctgcgtgtgccgggtgcgttcgatggg
tttgaaatggtgatccgcgccattctcggacagcagatcaccgtgaaggccgcgacgacc
atctcgtgccgcttcgcagatgccttcggagagaaattcgaaacgcccttcccagaactc
acacgcctcacccctctcgcgagccgcgtcgcgcgagccagcgtcgatgatgtggcgaag
ctcggcatcgtgagcgcgcgttccaggaccatcattgccatcgccgaggccttccactcc
ggttcgctgaagctcgaggcgggagccaatccggacacggccatcgcgcagcttgtggcg
ctgcccggcatcggcccctggacagcgcactacattgccatgcgagccctgcgctggccg
gacgcctttccgaaggaggacatcgccgtacgcaacaacctcggtggcgtgagtgcgaag
caggcggaggaattgtcgcaggcctggcggccatggcggagttatgcggtgatgcacgtg
tggcggaatccgcctcctccactgaagaaatag
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