Roseimicrobium sp. ORNL1: G5S37_11110
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Entry
G5S37_11110 CDS
T06460
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
roo
Roseimicrobium sp. ORNL1
Pathway
roo00541
Biosynthesis of various nucleotide sugars
roo01100
Metabolic pathways
roo01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
roo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
G5S37_11110 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
roo01005
]
G5S37_11110 (kdsA)
Enzymes [BR:
roo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
G5S37_11110 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
roo01005
]
Lipid A
G5S37_11110 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QIF02057
UniProt:
A0A6G6K3N0
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Position
complement(2724403..2725245)
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AA seq
280 aa
AA seq
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MPAPFLNSLPIVDLGHGVRFDGVQPVFILGPCVIESEDFVWDMARRIKAIADELGLRWVF
KASYDKANRTSGKSYRGMSLEEGCGILAAIGKELGVPVTTDVHSPEEATRAAEWIDFLQI
PAFLCRQTDLIEAAGRTGRAVNVKKGQFLAPWDVKNIGDKLLSVGCTNFVFTERGTTFGY
QNLVADMRSLYWMRELGYRVVMDATHSVQRPGGQGTTTGGDGKLAPVLARAAVAAGVDGV
FIETHVDPSKALSDGPNQIPVSDLKGLLSQLLRIHEIAKE
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgccccgttcctcaactccctccccatcgtggatcttggccatggtgtccgcttc
gatggtgtccagccggtgttcattctcggcccgtgtgtgattgaaagtgaggacttcgtg
tgggacatggcacgccgcatcaaggcgattgccgatgagctgggcctgcgctgggtcttc
aaggcgagctatgacaaggcgaaccgcacctcgggcaagagctaccggggcatgagtttg
gaagagggttgcgggattctcgccgccatcggcaaagagctgggcgtgcccgtgacgacg
gatgtgcacagccccgaggaggccacgcgcgcggcggagtggatcgattttctccaaatc
cccgccttcctctgccgtcagacggacctcatcgaggcggccggacgtacgggccgcgcg
gtgaatgtgaagaagggccagttcctggcgccctgggatgtgaaaaacattggagacaaa
ttgctctccgtggggtgtactaatttcgtattcactgaacgtggaactacgttcggatat
caaaacctcgtcgccgacatgaggtcactctactggatgcgggaactgggctaccgtgtg
gtgatggacgccacacactcggtgcagcgtcccgggggccagggcaccacgacgggtggc
gatggcaagctggcgccggtgctggctcgcgccgcagtcgccgctggggtggacggtgtt
ttcattgaaacgcatgtggacccttccaaggcactgagcgatggtcctaatcagatcccg
gtgtccgatctaaagggtctgctcagccagttgttgcgcatccacgaaatcgcgaaagag
taa
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