Roseimicrobium sp. ORNL1: G5S37_15160
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Entry
G5S37_15160 CDS
T06460
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
roo
Roseimicrobium sp. ORNL1
Pathway
roo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
roo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
G5S37_15160 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
roo01007
]
G5S37_15160 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
roo03016
]
G5S37_15160 (aspS)
03029 Mitochondrial biogenesis [BR:
roo03029
]
G5S37_15160 (aspS)
Enzymes [BR:
roo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
G5S37_15160 (aspS)
Amino acid related enzymes [BR:
roo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
G5S37_15160 (aspS)
Transfer RNA biogenesis [BR:
roo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
G5S37_15160 (aspS)
Prokaryotic type
Other AARSs
G5S37_15160 (aspS)
Mitochondrial biogenesis [BR:
roo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
G5S37_15160 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QIF02804
LinkDB
All DBs
Position
3734169..3736004
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AA seq
611 aa
AA seq
DB search
MSQTPYRTHHCNELRPEHIGMNVTLSGWVNSARDQGGVIFVDLRDREGITQIVFRSEENP
EAAKASHKLRDEDVLQVSGQVVKRLEGTDNDKLATGAVELVVSDLKILNKAAVLPFQLDK
ELSNEDLRLKYRYLDLRRPRMNKNLRLRHRAVKATRDFLDAAGFVEVETPILSKSTPEGA
RDFLVPARLNPGRFYALPQAPQQYKQMLMVAGLERYFQIARCFRDEDLRADRQPEFTQID
LEASFVTEEDMYAIVEGLLHSVFKAARGVDIPTPFPRMTWKEAMDRYGIDKPDTRFGNEI
VDLGDVFANTEFKIFRNVLQSGGVVRAINAKGFACLTTGQMNRLNEIAVQAGLPVKNLAF
IKLENGEYKSPLWRIFTEEEKAAVIAKTNLEEGDIIFFVAGPWESTCTILGRVRLEAAAM
QELVKDSDALNFLWVVDFPLLAYSEEDAKWCAVHHPFTRPKTEDIPLLEAGEYNKVRAVA
YDVVLNGTELGGGSLRIHESDLQAKMFTVLGVNEHEQQEMFGHILEAFQFGAPPHGGLAL
GLDRLVMLAAGEDSIREVIAFPKNNRGQELMTQSPSTADFKQLREIYIQSTFKPKTKEED
AQQKAPAETTA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaccccataccgtacccaccactgcaacgaactccgtcccgaacacatcggg
atgaatgtgacgctgtccggctgggtgaattcggctcgtgaccagggcggtgtgattttc
gtggacctccgtgaccgtgagggcatcacgcagattgtgtttcgctcggaagagaacccg
gaagccgccaaagccagccacaagctgcgcgatgaggacgtgctccaagtgtccggccag
gtggtgaaacgcctcgaaggcacggacaacgacaagctcgccaccggcgccgtggagctc
gtggtctccgacctcaagattctcaacaaggccgccgtcctccccttccagctcgacaag
gagctgagcaacgaagacctgcgcctgaagtaccgctacctcgacctgcgccgcccgcgc
atgaacaagaacctccgcctgcgccaccgcgcggtgaaggccacgcgcgacttcctggac
gccgccggattcgtggaggtggagacccccatcctttccaagtccaccccggaaggcgcg
cgcgacttcctcgtgcccgcccgcctgaacccggggcgcttctacgcccttccccaggcg
ccgcagcagtacaagcagatgctcatggtcgccggcctggagcgctatttccagattgcc
cgctgcttccgcgacgaagaccttcgcgccgaccgccaacccgagtttacccagatcgac
cttgaggccagcttcgtcaccgaagaggacatgtacgcgatcgtcgaaggtctgctgcac
agcgtcttcaaggcggctcgcggtgtggacatcccgacccccttccctcgcatgacgtgg
aaggaggcgatggaccgctacggcattgacaagcccgacacgcgtttcggcaacgaaatc
gtggacctcggtgatgtcttcgcgaacaccgaattcaagattttccgcaatgtcctccag
agcggcggcgtggtgcgtgccatcaatgcgaagggttttgcctgcctgaccaccggtcag
atgaatcgcctcaacgagatcgccgtccaggcaggtctgccggtgaagaacctggccttc
atcaagctcgaaaacggtgagtacaaatccccgctgtggaggatcttcaccgaggaagag
aaagccgcagtcatcgcgaagaccaaccttgaggaaggcgacatcatcttcttcgtggcc
ggtccttgggaaagcacctgcaccatccttggtcgcgtgcgtctcgaagcagccgccatg
caggagcttgtgaaggacagcgacgcgctgaacttcctctgggtcgtagacttccccctt
ctcgcctacagcgaggaggacgcgaagtggtgcgctgtgcaccaccccttcacccgtccc
aagacggaggacattccccttctcgaagcgggtgagtacaacaaggtgcgcgccgtggcc
tacgacgtggtgctgaacggcaccgaactcggcggcggctccctgcgaatccacgaaagc
gatttgcaggcgaagatgttcaccgtgcttggtgtgaatgagcacgagcagcaggagatg
ttcggccacatcctggaagccttccagttcggcgcgcctccccacggtggtctcgccctc
ggcctcgatcgcctcgtcatgctcgccgccggtgaggacagcatccgcgaagtcattgcc
ttcccgaagaacaaccgcggccaggaactgatgacccagagcccgagcaccgccgacttc
aagcagctccgcgaaatctacatccagagcaccttcaagccgaagacgaaggaagaggat
gcgcagcagaaggcaccggcggagacgacggcgtaa
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