Roseimicrobium sp. ORNL1: G5S37_17940
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Entry
G5S37_17940 CDS
T06460
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
roo
Roseimicrobium sp. ORNL1
Pathway
roo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
roo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G5S37_17940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roo03400
]
G5S37_17940
Enzymes [BR:
roo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
G5S37_17940
DNA repair and recombination proteins [BR:
roo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G5S37_17940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QIF03323
UniProt:
A0A6G6K7A2
LinkDB
All DBs
Position
4422993..4423970
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AA seq
325 aa
AA seq
DB search
MPVSSPLLQEYLNQLSARGVTHVALTDEARAVLSTATARGARQSPSTPAPSPAVGPVGRG
PIPGGSPSPSSTASPRSAEAMSAQRSSPTGTPLRPTQPTSATADSATAPTRSKRELLDEL
AREAENSQPARDLGTLRDVMVFAVGNPDADIMFIGEAPGAEEEKQREPFVGPAGQLLTKI
IQAMGLRRSEVYISNVCKFRPKIDDGRMQGSKNRAPTTGEMLACQPYIMAEINIIKPRAI
VCLGATASTGLGIEGTVGRLRGRIQEWRGHPLAVTYHPSYLLRREAEDGGGLAEKRLVWE
DMMRVMETVGLPISDKQRGYFSRAR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgtcctcccccctgctgcaagagtacttgaaccagctctccgcccgaggagtg
acccacgtggcactcaccgacgaggcgcgcgcggtgctgtcgacggcaacggcgcgggga
gctcgccagtccccatccacacccgccccctctcccgcagtcggaccggtcgggcgaggc
ccgataccgggcgggtcgccatcaccttcctccaccgcctccccccggtcggcggaggcc
atgtccgcccaacgttcttccccgacgggcacccctcttcgccccacccagccgacatca
gcgaccgccgactccgccaccgctcccacccgctccaagcgcgagctgctggatgagctg
gcccgcgaggcggaaaacagccagccagcccgcgacctaggcaccttgcgggatgtcatg
gtcttcgccgtggggaacccagacgcggacatcatgttcatcggcgaggcgccgggcgca
gaagaggagaagcagcgcgagccctttgtgggacccgccggccagctcctgaccaagatc
atccaggccatgggcctccgccggagcgaggtctacatcagcaacgtgtgcaagttccgc
ccgaagatcgatgacggccggatgcagggcagcaagaatcgggcgcccaccaccggagag
atgctggcctgccagccgtacatcatggcggagatcaatatcatcaagccgagggccatc
gtctgtctcggcgccaccgcctccaccggcctgggaatcgagggcacggtgggcagattg
cgcggccggattcaggaatggcgcggacatccgctggcggtcacctaccaccccagctac
ctcctccgccgcgaggccgaggacggcggcggcctggcggagaagcgcctggtctgggag
gacatgatgcgcgtgatggagaccgtgggcctcccgatttccgacaagcagcgggggtac
ttcagccgggcgcggtag
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